3D Structure for MGV-GENOME-0258951_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.67 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0258951_CDS_0040 1 AcrIE6 0.73 View Alignment MGV-GENOME-0258951_CDS_0040 M N -N G N E L K A R I E E L E Q D L I F Y L R K Y H E L A P ---R ----S K N M K A V L D K E I K W H E E E ---(60)
MN L I E + + L ++ K + + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P -M Y T A V M V T Y D L I G K Q L A S R R A E L I E
MGV-GENOME-0258951_CDS_0040 -I K ----R -L -S --K -L ---L -Q (83)
+ L
AcrIE6 I L E E Q Y P -G -H -A A D L S I K N L C P
MGV-GENOME-0258951_CDS_0040 2 AcrIIC4 0.63 View Alignment MGV-GENOME-0258951_CDS_0040 M N -N G N E L K --------A -R I E E -----------L E Q ----D -L -I F Y L R K Y H ---E -L A (60)
M + + A + L +
AcrIIC4 M K I T S S N F A T I A T S E N F A K -L S V L P K N H R E P I K G L F K S A V E -Q -F S S A R D F F K N E N -Y S -
MGV-GENOME-0258951_CDS_0040 -P -R -S K N M K A -V L -D K -E -I -K W H E E E I K R L S K L L --Q (99)
+ I + K
AcrIIC4 K -E -L A E K F N K E -A V N -E -A -V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0258951_CDS_0040 3 AcrIF23 0.59 View Alignment MGV-GENOME-0258951_CDS_0040 M N N G N -E L K --------------A R I ------------------E ---------------(60)
M+N + L +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L --E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0258951_CDS_0040 -------E ----------------------------L E -------Q -D -L --------I - (120)
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F -W -I E N R N D S A -Q
MGV-GENOME-0258951_CDS_0040 F -Y L R K Y H E L A P R ----S K -N M K A -V L D K E I K W H E E E I K R L S K L L -Q (167)
+ + KA + E L+
AcrIF23 -E -I A G F V M Q Q K A L L A Q H -R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0258951_CDS_0040 4 AcrIE1 0.58 View Alignment MGV-GENOME-0258951_CDS_0040 M -N ----N G -N E L -K -------A ----R I -E E -----------------L E Q D L I -F Y -L (60)
M EE ++L+
AcrIE1 M E K K L S D A -Q V A -L -V A A W R K Y P D L R E S -L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y -I R
MGV-GENOME-0258951_CDS_0040 R K Y H E L A P R ----S K N M K A V L D K E I K W H E -E -E I K R L -S -K L ---L -Q (108)
R E A M+A R+ +
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W V E V C G E V -N -Q H G I R V Y -G D A I D R D V D
MGV-GENOME-0258951_CDS_0040 5 AcrIF25 0.54 View Alignment MGV-GENOME-0258951_CDS_0040 M N -N G N E L K -------------------A -R -I -E E ------------------------(60)
M
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L -E -G M -K L T D W I T G R V E A K A L S I A E V L E E A
MGV-GENOME-0258951_CDS_0040 --L E ---------------Q D -----------L ------------------------I F Y (120)
D
AcrIF25 A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R -F S A A T D D A T R L D A A L W A R E G Y Q L L S S G
MGV-GENOME-0258951_CDS_0040 L R -K Y H E L A P R -------S K N M -K -A -V L D K ----E I K W H E E E I K R L S K L L -Q (173)
L Y ++P + + + I E+ + K
AcrIF25 L P D S Y S G A V P N E G R T G W V T A S Q M -A -R L F G -G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;