3D Structure for MGV-GENOME-0251580_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.21 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0251580_CDS_0003 1 AcrIIA33 0.84 View Alignment MGV-GENOME-0251580_CDS_0003 M I T W T G K S T D G R W N K T V E A E S Y F E L L E K L V D K G Y I G D Y I D S D S Q L F H E L G Y V S Q E V S E L E (60)
MI WTGKSTD W +TVEAE+Y LLE LVDKGYIGDYIDSDSQLFHEL YVS V +LE
AcrIIA33 M I K W T G K S T D K G W I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y V S P A V A D L E
MGV-GENOME-0251580_CDS_0003 E R L N D E D T V D D A L V E L E N F E W D K I L R N L T D K E I E S A I R G C D S Q A Y Y Q E F E V T Q (113)
+RLNDE +V+ AL +LENF+W ++ LTD +AI GC SQAYYQEFEV
AcrIIA33 D R L N D E H Q V E Q A L E D L E N F D W N R V F E K L T D Q Q F Q T A I A G C T S Q A Y Y Q E F E V I E
MGV-GENOME-0251580_CDS_0003 2 AcrIIC5 0.63 View Alignment MGV-GENOME-0251580_CDS_0003 M I --T -W T G K S T D G R W N K T V E A E S Y F E L L E K L V D K G -Y ---I G D -Y I D S D S Q L F -H E L G Y (60)
M + DG + + S E
AcrIIC5 M N N S I K F H V S -Y D G T A R A L --F N T K E Q A E K Y -C L V E E I N D E M N G Y K R K S W E E K L R E E ---
MGV-GENOME-0251580_CDS_0003 V -S -Q E V S E L E -E R L N D E -D T V D D A L V E L E N -F --E W D K I L R -N L T D K E I E S A I R G C D S Q (120)
V++ + D+ + ++ + E++ + C
AcrIIC5 N C -A -S V Q D W V E K -N -Y -T S S Y S D L F N -I C E I E V S S A G Q L V -K -I D N T E V D D F V E N C Y G F
MGV-GENOME-0251580_CDS_0003 A Y -------------Y Q E -F E V -T Q (145)
Q +
AcrIIC5 T L E D D L E E F N K A K Q Y L Q K F Y A E C E N
MGV-GENOME-0251580_CDS_0003 3 AcrIF13 0.59 View Alignment MGV-GENOME-0251580_CDS_0003 M I T W T G K S T D G R W N K T V E A E S Y F E -L L E K L V D K G Y I G D Y I D S D S Q L F H E L -G Y V S Q E V S E (60)
M + K + L L + + EV+E
AcrIF13 M K L L N I K I N -E F A V T A N T E A G D E -L Y L -Q L P H T P D S Q -H S I N H E P -L D D -D -D F V K E V Q E
MGV-GENOME-0251580_CDS_0003 L -E E R L N D E -D T V D D A L -V E L E N F E W D K --I L -R N L T -D -K -E I E S A I R G C D S Q A Y Y Q -E (120)
+ +E T+ + + D + ++ + YY
AcrIF13 I C D E Y F G K G D R T L A R L -S -Y A G G Q A Y D S Y T E -E D G V Y T -T -N T G D Q F V E H S Y A -D Y Y -N V
MGV-GENOME-0251580_CDS_0003 --F E V ---T Q (130)
AcrIF13 E V Y C K A D L -V
MGV-GENOME-0251580_CDS_0003 4 AcrIC5 0.59 View Alignment MGV-GENOME-0251580_CDS_0003 M I T W T G K S T D G R W N K T V E A E S Y F E L L E K L V D K G Y I G D Y I D S D S Q L F H E L G Y V S Q E V S E L E (60)
M + G ++ + V+
AcrIC5 M S K V -T L -N -G Q ---Q I ---------------D F ------------D A A ------V N L M -
MGV-GENOME-0251580_CDS_0003 E R L N D E D T V D D A L -V -E -L E N -F E W D K I L R N L T D K E I E S A I R G C D S Q A Y -Y Q -E F E V T Q (119)
+ +++ ++ + EF V
AcrIC5 ---D -A E L R E E L -H -S -A -Q E W T ---N D Q -----E F L D A Y V -Q A H A A K F D G -E E F Q V -A
MGV-GENOME-0251580_CDS_0003 5 AcrIIA26 0.59 View Alignment MGV-GENOME-0251580_CDS_0003 M I T W T G K S -T -D ---G --R W N K T V E A E S Y ---F E L L E K L V D K G -----------------(60)
M + + + ++ ++ LVD
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D E
MGV-GENOME-0251580_CDS_0003 ------------Y I G -D -Y I ---D S D -S ----Q L -F H E L -G Y V --S ----Q E V S E L E E R L (120)
+ E+
AcrIIA26 Y N G V Y E N D G D T G E F V G -Q V F E N K V T -E -E Q F K E -L L E Q -L E I T Y T E F D P E E E L A K C I A N K
MGV-GENOME-0251580_CDS_0003 -N D E D T ----V D D A L -V E L -E N F E ---W D K I L R N --------L -T D K -E -I -E -S -A I R - (180)
+ + + E+ ++ D + +
AcrIIA26 N R K S E F Y G N G L K V I -A E Y -L E S I S H E D A L A V V T -Y Y Y F Y F G F G Y E D -Q -L -I -S -D I -K D
MGV-GENOME-0251580_CDS_0003 G -C -D -S Q A Y Y Q E F E V ---T Q (201)
+ E
AcrIIA26 -D -Q -E D G V K F E H V E R S E T -I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;