3D Structure for MGV-GENOME-0251198_CDS_0025 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.76 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0251198_CDS_0025 1 AcrIE6 0.71 View Alignment MGV-GENOME-0251198_CDS_0025 M N -R M T A ---L A L T V -D A C K D G -L W R M E R Y A S L G H -M T K A D H E A V D E A R K A L S T L G Q Y A Q (60)
MN + + + D R + + M A D + K L + +
AcrIE6 M N N D T E V L E Q Q I K A F E -L L A D E L K D R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0251198_CDS_0025 G Q ----L ----D R I -E -E --E (81)
+
AcrIE6 E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0251198_CDS_0025 2 AcrIE1 0.70 View Alignment MGV-GENOME-0251198_CDS_0025 M -N ----R M T A L A ----L -------T ----V -D --------A -C -K -D ----G L W R M E R Y (60)
M AL + + Y
AcrIE1 M E K K L S D A Q V A L -V A A W R K Y P D L R E S L E E A -A -S I L S L I V F -Q -A -E -T L S D Q A N E L A N Y
MGV-GENOME-0251198_CDS_0025 A S L G H M ---T K A D H E A V D E A R K A L S T L G Q Y ----A -Q -G -Q -L D R I -E E --E (112)
+ +D R + + + +
AcrIE1 I R R Q -G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H -G -I -R -V Y G D A I D R D V D
MGV-GENOME-0251198_CDS_0025 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0251198_CDS_0025 M N -R ---M T A -L A ----------L -------T V D ----A C K D G L W R M E R Y A S L G H M T K -A (60)
M + + + + +K +
AcrIIC4 M K I T S S N F A -T I -A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0251198_CDS_0025 D H E A V D -E A -R K -A -L -S T L G -Q Y A Q G Q L D R I E -E E (96)
A A +++
AcrIIC4 A E K F N K E -A V N -E -A -V E -K L Q -K A I D L A E K Q G I Q F
MGV-GENOME-0251198_CDS_0025 4 AcrIC3 0.57 View Alignment MGV-GENOME-0251198_CDS_0025 M -N ------------------R M T A -L -A ----L T V D ---A -C K D -------G L W -R M E R (60)
M +D + R
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A -S -S -G Q V K F M A D K T D R G -L E S R F L V P E A G N R R I -E
MGV-GENOME-0251198_CDS_0025 Y A S L ---G H M T K ----A D H E A V D E A R K A L S T L G Q Y -A Q -G Q -L -D R I E E E (110)
A V+ L + E
AcrIC3 V A L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A -E R -A Q -I -N K -A L E G
MGV-GENOME-0251198_CDS_0025 5 AcrIF25 0.57 View Alignment MGV-GENOME-0251198_CDS_0025 M --------------------------------N -----------R M T A ---L -A -L -T -(60)
M + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L -E -E -A
MGV-GENOME-0251198_CDS_0025 V -D ----A C K D --------G ----L W R M E R Y A S L G H ---M T K A D H -E -A V D E A R K A L S T L (120)
D + A A + A+ AR + L
AcrIF25 -A -A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F -S A A T D D A T R L -D A A L W A R E G Y Q L L
MGV-GENOME-0251198_CDS_0025 G Q Y A Q --------------------------G --------Q ---L D R I -E -E -E (174)
+ + L + +
AcrIF25 S S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G -G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;