3D Structure for MGV-GENOME-0250433_CDS_0010 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.86 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0250433_CDS_0010 1 AcrIE6 0.70 View Alignment MGV-GENOME-0250433_CDS_0010 M A I D F ---K K L Y E S ----R I K E I D I Q I K K A I Q L K --K W ----A V ----K K -S -L -E E -E -(60)
M + E+ + + +
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G -K -Q -L A -S -R
MGV-GENOME-0250433_CDS_0010 K E R L L A H I S L I ----D -K -N -N --C C V (87)
+ L+ + C
AcrIE6 R A E L I E I L E E Q Y P G H -A A D L S I K N L C P
MGV-GENOME-0250433_CDS_0010 2 AcrIIC4 0.57 View Alignment MGV-GENOME-0250433_CDS_0010 M A -I -D F K K ------------L -Y -E -S -----------R I K -E I D I -Q I K -K A I Q L K --(60)
M + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L -P -K -N H R E P I K G L F K S A V E -Q F S S A -R D -F F K N E N Y
MGV-GENOME-0250433_CDS_0010 ----K W A V K K -S L -E -E -E -K E R L L A H I S L I D K N N C C V (98)
K + E+L I L++K+
AcrIIC4 S K E L A E K F N K E -A V -N -E -A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0250433_CDS_0010 3 AcrIF23 0.51 View Alignment MGV-GENOME-0250433_CDS_0010 M A -I -D F K K ---L Y E ------------------------S --------------------(60)
M + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0250433_CDS_0010 -------------------R -I ----K -------E I D I Q I K K A I Q L K ---K W ----A V K K (120)
+ A+ +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K -V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R -N D S A Q E I A
MGV-GENOME-0250433_CDS_0010 S L E E E K E R L L ----A -H -I ---------S L I ---D K -N N -C -C -V (165)
LL I
AcrIF23 G F V M Q Q K A L L A Q H R -S -A -K A A G Q A D K V A K I A A E Y N A -L T A R W G F
MGV-GENOME-0250433_CDS_0010 4 AcrIF25 0.51 View Alignment MGV-GENOME-0250433_CDS_0010 M A --------------------------------------------I -D F K K ----L Y E -(60)
M +
AcrIF25 M D N D D K K P D A L I H L R V P A E V K G R W V K E S R L E G M K L T D W I T G R V E A K A L -S I A E V L E E A -A
MGV-GENOME-0250433_CDS_0010 -----------S -----------R I K E I D I Q I K K A I Q L K -------------------K W (120)
I + A
AcrIF25 A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G L P
MGV-GENOME-0250433_CDS_0010 ----A V ---------------K K S L E E E K E R L L -A -H -I -S L I D K N N C --C V (172)
L + + +
AcrIF25 D S Y S G -A V P N E G R T G W V T A S Q M A R L F G G E A L W I E -R -C -Q Q E L G G A G K E D G R
MGV-GENOME-0250433_CDS_0010 5 AcrIE1 0.50 View Alignment MGV-GENOME-0250433_CDS_0010 M A --I -D F K K L Y E ----------S -----------------R I -K -E -I -D -I -Q I K -K A (60)
M + D + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S -D -Q -A -N -E L -A N Y I
MGV-GENOME-0250433_CDS_0010 I Q L K K W A V ----------K -K -S -L -E -E -E -K E -R -L L -A H I S L I D K N -N C -C -V (116)
+ H +
AcrIE1 R R -Q G L E E A E G A C R N I D I M R -A -K -W -V -E -V C -G -E V -N Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;