3D Structure for MGV-GENOME-0249038_CDS_0062 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0249038_CDS_0062 1 AcrIE6 0.70 View Alignment MGV-GENOME-0249038_CDS_0062 M T -L D E -L K A -E I S E ----R I E S E Q D K L D S L N N R K S R ----K -D R N Y Y I S E G M ----L I A (60)
M+ E ++ D+L +L S +Y + +
AcrIE6 M N N D T E V -L E Q Q -I K A F E L L A D E L K D R L P T L E I -L S P M Y T A -V M V T Y D L I G K Q L A S R R A E
MGV-GENOME-0249038_CDS_0062 F Q I V A D -Y -L ----N D -L -E V --L -E (86)
+++ + L
AcrIE6 L I E I L E E -Q -Y P G H A A D -L S I K N L C P
MGV-GENOME-0249038_CDS_0062 2 AcrIIC4 0.59 View Alignment MGV-GENOME-0249038_CDS_0062 M -T L D -E L K A --------------------E I ----S E -R -I E -S E Q -D K L D S L N N --R K (60)
M A + D N
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P -I K G L F K S -A -V E Q -F S S A R D F F K N E N Y -
MGV-GENOME-0249038_CDS_0062 S R ----K D R N Y Y I S E G M L I A F Q I V A D Y L N D L E V -L E (96)
N + + Q ++D +
AcrIIC4 -S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K -Q G I Q F
MGV-GENOME-0249038_CDS_0062 3 AcrIE1 0.57 View Alignment MGV-GENOME-0249038_CDS_0062 M -T -L D ---E L K A --------------E I ----S -E --------R -I -E -S -E Q D -K -L D (60)
M L + + E+
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L -S -L I V F Q A E T -L -S -D -Q -A N E -L -A
MGV-GENOME-0249038_CDS_0062 S L N N R -K S R K ----D R N Y Y I S E G M L I -A F Q -I V A D Y -L ----N D L E V --L -E (112)
+ R RN I + + V + +
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V -C G E V N Q -H -G I R V Y G D A I D R D V D
MGV-GENOME-0249038_CDS_0062 4 AcrIF23 0.54 View Alignment MGV-GENOME-0249038_CDS_0062 M -T L D E L K A ----E I S --------------------------------------------(60)
M + ++
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0249038_CDS_0062 -------E -----------R -I E ----S E Q -------D K L D S -L N N -R K S R ---K D R N Y Y (120)
+ ++Q L + +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A -K F W I E N R N D S A Q E I A
MGV-GENOME-0249038_CDS_0062 I S E G M L I A F Q I V A ----------------D -Y -L -N D L E V --L -E (165)
A + N L
AcrIF23 G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A -A -E -Y N A L T -A R W G F
MGV-GENOME-0249038_CDS_0062 5 AcrIF25 0.53 View Alignment MGV-GENOME-0249038_CDS_0062 M T -L D -E L K A ---------E I S ---------------E -----------R I E -------S (60)
M D A + I
AcrIF25 M D N D D K K P D A L I H L R V P A E V -K G R W V K E S R L E G M K L T D W I T G R V E A K A L S I A E V L E E A A A
MGV-GENOME-0249038_CDS_0062 E Q --------------------------D K -L D S L N N R -K S R ------------------(120)
++
AcrIF25 M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A -R F S A A T D D A T R -L D A A L W A R E G Y Q L L S S G L
MGV-GENOME-0249038_CDS_0062 ----------K D -------R N Y Y I S -E -G M -L I A F Q I V A D Y L N D L E V -L -E (171)
+ ++ L +
AcrIF25 P D S Y S G A V P N E G R T G W V T A S Q M A R L F -G -G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;