3D Structure for MGV-GENOME-0248791_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.92 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0248791_CDS_0003 1 AcrIE6 0.72 View Alignment MGV-GENOME-0248791_CDS_0003 M D K S K F N R A I E L N E K I E K Y K S H K A E L E R S N I R Y G G G L I --F T Y S Q M -H N -D V R L K K E I F G (60)
M + L I EL Y+ + K +
AcrIE6 M N -N D ---T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I --L S P M Y T A V M -V T Y D L I G K Q L A S
MGV-GENOME-0248791_CDS_0003 --N D F F R N Y M N -A L -D -N -K -I -E -T -L Q -K --E F D E --L (100)
L
AcrIE6 R R -A E L I E I L E E Q -Y -P -G -H -A -A -D L -S -I K N ---L C P
MGV-GENOME-0248791_CDS_0003 2 AcrIF23 0.61 View Alignment MGV-GENOME-0248791_CDS_0003 M -D -K S K F N -R ---A I E --------L N ---------------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0248791_CDS_0003 E -------K --------I -E -K Y -K -S H K -A E L E R S N I R Y G G G L I F T Y S Q M H -N D V R L K K (120)
+ + + GL+ N
AcrIF23 G R A L T G T A R Q K E W A E K I -R -A E -K -V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q
MGV-GENOME-0248791_CDS_0003 E I F ----G N D F F R --------N Y M N A -L -D -N -K -I -E -T -L -Q -K -E F D E ---L (175)
EI +
AcrIF23 E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K -V -A -K -I -A -A -E -Y -N -A L -T A R W G F
MGV-GENOME-0248791_CDS_0003 3 AcrIE1 0.61 View Alignment MGV-GENOME-0248791_CDS_0003 M D ---K S K F N R A I E -------L N E K I E K Y K S H K A E L E R S N I R Y G G G L I F T Y S Q M --H N D V (60)
M+ ++ L E +E S + + + + + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q G L
MGV-GENOME-0248791_CDS_0003 R L K K E I -F G N ----D F F R N Y M N A L D N K I E T L -Q -K E F D E --L (102)
+ + + ++ + D
AcrIE1 E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G D A I D R D V D
MGV-GENOME-0248791_CDS_0003 4 AcrIIA28 0.58 View Alignment MGV-GENOME-0248791_CDS_0003 M D -K S K F N R A I E L -N E K -I E K Y -K S H K A E L E R S N I R Y G G G L I F T Y S Q M -H N D -V R L K K E I (60)
M EL N+ IEK K + +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K -Q K E L F N S M H D F R S Q H A K E A ----R -I P -G W S -D K Y N K L
MGV-GENOME-0248791_CDS_0003 F G N D F F -R -N Y M N -A L D N K I E T ------L Q K E F D E ----L (100)
+ K +T
AcrIIA28 -E K K M -L -S -D F E E V T G I K Y D T L E S E L I W D N L S N K F L Y N S
MGV-GENOME-0248791_CDS_0003 5 AcrIIC4 0.57 View Alignment MGV-GENOME-0248791_CDS_0003 M -D -K S K F N R A I E L ------N E K -I E K Y K S H K A E L E R S N I R Y G G G L I F T Y -S Q M H N D V R L (60)
M S F ++ + + L +S + + + L
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V -L P K N H R E P I K G L F K S A V E Q F S S A R D F F K -N E N Y S K E L
MGV-GENOME-0248791_CDS_0003 K K E I F G N D F F R N Y M N A L D N K I E T L Q K E F D -E L (92)
F + L I+ + K
AcrIIC4 A E K -F N K E A V N E A V E K L Q K A I D L A E K Q -G I Q F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;