3D Structure for MGV-GENOME-0247583_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.77 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0247583_CDS_0002 1 AcrIIA21 0.76 View Alignment MGV-GENOME-0247583_CDS_0002 V S ------Y -F D S I Y A D ---T L L P P R A V S V Y M Y L K D R S N S ---------V -G S -C W P G I K (60)
+ D + L + + VY LKDR+ +
AcrIIA21 M D Y D N E N Y L I P K I L L Q D D F Y S S L S A K D I L V Y A V L K D R Q I E A L E K G W I D T D G S I Y L N F K L I
MGV-GENOME-0247583_CDS_0002 T I A R D M N L S R S T V K R A L A D L E Q H G Y L A K L P R Y R P N G S N T S N L Y T L --K (108)
+A+ + SR+T + LE + + G + +
AcrIIA21 E L A K M F S C S R T T M I D V M Q R L E E V N L I E R E R V D V F Y G Y S L P Y K T Y I N E V
MGV-GENOME-0247583_CDS_0002 2 AcrIA3 0.50 View Alignment MGV-GENOME-0247583_CDS_0002 V S -Y --F D S I Y A D ------T L L -P P R A V -S V -Y M Y L -K D R S N -S V G S C -W P G I K T ---I A (60)
S Y + L + G P + +
AcrIA3 M S F Y I M Y I K V K E -M S E Q K Q I S L R S K -Q K E -L L Q R -F F E I A E V D E N G D L C I P L Y D S S G D L T
MGV-GENOME-0247583_CDS_0002 R -D -M -N L S R S T V K -R A L A -D L E -Q -H G Y L A K L P R Y R P N G S -N -T -------------S -(120)
+ K
AcrIA3 -L -F K Q D S R ---K -Y Q M Y -A Y F -R -I L R L I K K Q I F F I K V K -K -V K R D K K F L C M H S N V I -D
MGV-GENOME-0247583_CDS_0002 N L Y T L --K (128)
++ ++
AcrIA3 Q V K S V L E S
MGV-GENOME-0247583_CDS_0002 3 AcrIE5 0.46 View Alignment MGV-GENOME-0247583_CDS_0002 V S -Y F D S I Y A D T L L P P R A V S V Y M Y L K D R S N S V G S C W P G I K T I A R D M -N L S R S T V K R A L A D (60)
S + ++ Y R + R+ +
AcrIE5 M S N D ---R N G ------I I N Q I I D Y T ---------------------G -T D R D H A E R I Y E E
MGV-GENOME-0247583_CDS_0002 L E Q H G Y L A K L P -R -Y R P N G S N T -------S -N L Y T L -K (98)
L + +G +
AcrIE5 L R A D D R I Y F D D S V G L D R Q G L L -I R E D V D L -M A V A A E I E
MGV-GENOME-0247583_CDS_0002 4 AcrIF16 0.45 View Alignment MGV-GENOME-0247583_CDS_0002 V S -----Y -F D S I Y A D ----------------------------T L --------------(60)
S +
AcrIF16 M S L S D K K E Q K E A Y L D A L R I A P L D R G V L K R I H A V N D N T L D K W L Y V A D R Y P T F R A C W E L W M F
MGV-GENOME-0247583_CDS_0002 -------------------L ------------------P P R A V S V Y M Y L K D R ----S -N S (120)
+ +R
AcrIF16 Q R K R R V L I S R K L H V L I N R S T N R T I E A F E K T Y P P E E R V V G K S Y R D L V T E K G E R S A N M -Y I -
MGV-GENOME-0247583_CDS_0002 -V G S C W P G I K T I A R D M -N L S R S T V K R A L A D L E Q H G Y L A K -L P R Y R P -N G S N -T -S N L Y T L (180)
G G+K + S+ + A G
AcrIF16 I N G -E V V G A K D A S I L L G Y ---S S Y N T L Y A K M K R L G I Q P G D D I ---S H L K P E K -R G -R K K E
MGV-GENOME-0247583_CDS_0002 -K (182)
AcrIF16 C S
MGV-GENOME-0247583_CDS_0002 5 AcrVA3 0.44 View Alignment MGV-GENOME-0247583_CDS_0002 V -S --Y --F D S I Y A -D ---------T L ---------------------------------(60)
+ SI
AcrVA3 M V G K S K I D W Q S I D -W T K T N A Q I A Q E C G R A Y N T V C K M R G K L G K S H Q G A K S P R K D K G I S R P Q
MGV-GENOME-0247583_CDS_0002 ---L ------------------------P P -R A V S V Y M Y L K -D R S N S V G S C W P G I K T I A R (120)
+ ++ ++ +
AcrVA3 P H L N R L E Y Q A L A T A K A K A S P K A G R F E T N T K A K T W T L ---K -S -P ---D N -K T Y T F T N L M H
MGV-GENOME-0247583_CDS_0002 D M N L S R S T V K --R A L A -D L E -Q -H G Y L A --K -L P R Y R P N -G -S -N T ---------S N L Y T (180)
+ ++ G + + L +
AcrVA3 F V R T N P H L F D P D D -V V W R T -K -S N G -V E W C -R A S S G L A L L -A -K R -K K A P L S W K G W R L I S
MGV-GENOME-0247583_CDS_0002 L ----K (186)
L K
AcrVA3 L T K D N K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;