3D Structure for MGV-GENOME-0246814_CDS_0057 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 84.11 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0246814_CDS_0057 1 AcrIE6 0.71 View Alignment MGV-GENOME-0246814_CDS_0057 M G K L D L E N L Q S I I E H L E V S R T N T E N I I E K Q N M T ------L F H S K D Y Y E G Q -L D T Y -N -D V (60)
M D E L + I E+ + + + D Q + + ++
AcrIE6 M N -N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A -S R R -A E L
MGV-GENOME-0246814_CDS_0057 I R M L K I Y Q G ----N S -K E -N -L (82)
I L
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0246814_CDS_0057 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0246814_CDS_0057 M G K L --D L E N ------L -Q ----S -------I I E -H -L E V ----S R T N T E N I I E ---K Q N (60)
M + I + ++ +
AcrIIC4 M K I T S S N F A T I A T S E N -F -A K L S V L P K N H R E P I K G -L F -K S A V E Q F S S A R D F F K N E N Y S K
MGV-GENOME-0246814_CDS_0057 M T L -F H S K D Y Y E -G Q L -D T Y N -D V I R M L K I Y Q G N S K E N L (99)
+ + + + + +
AcrIIC4 E L A E K ----F N K E -A V N -E A V E -K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0246814_CDS_0057 3 AcrIE1 0.61 View Alignment MGV-GENOME-0246814_CDS_0057 M G K L ---D L E N L Q --------------S ----I I E ----H -L -E V -S -R -T ----N T E N I (60)
M K L I+ N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E -E A A S I L S L I V F -Q -A -E T -L -S -D Q A N E L A N Y
MGV-GENOME-0246814_CDS_0057 I E K Q N M T ----L F H S K D Y Y E -G Q L D -T Y N D V I R M L K I Y Q G N S K -E N -L (108)
I +Q + ++ D +V G
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A -K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0246814_CDS_0057 4 AcrIF25 0.60 View Alignment MGV-GENOME-0246814_CDS_0057 M G K -L ---D L E ---------N -L -Q ---------------S ----I ----I E ----H L E -(60)
M D+ + +
AcrIF25 M D N D D K K P D A -L I H L R V P A E -V -K -G R W V K E S R L E G M K L T D W I T G R V E A K A -L S I A E V L E
MGV-GENOME-0246814_CDS_0057 ---V -S R T -----------------------N T E N I I E K -Q N M T ---------------L (120)
++ + L
AcrIF25 E A A -A M A -R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L
MGV-GENOME-0246814_CDS_0057 -F ------------------H S K D Y Y E G Q L D T Y N D V I R M L K I Y Q G N S K -E N -L (173)
+ I G E
AcrIF25 S S G L P D S Y S G A V P N E G R T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
MGV-GENOME-0246814_CDS_0057 5 AcrIIA28 0.53 View Alignment MGV-GENOME-0246814_CDS_0057 M G -K L ---D L E N -L Q ----S I I E H L E V S R T -N T E -N I I E K Q ------N M T L F H S K D Y Y -E (60)
M E L+ L S + K + +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D -F R S Q -H A K E A R I P G W S D K Y N K L E K K M L -
MGV-GENOME-0246814_CDS_0057 -G Q L D -T Y N D V I R M L K I Y --Q -G N S -K --E --N L (94)
+ L N N
AcrIIA28 S -D F E E V T G I K Y D T L E S E L I -W D N L S N K F -L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;