3D Structure for MGV-GENOME-0245073_CDS_0003 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.38 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0245073_CDS_0003 1 AcrIE6 0.75 View Alignment MGV-GENOME-0245073_CDS_0003 M S -L V S K I K N E I Q E A E K K I I L C N A Q L L E A V E R E ---D E P S C C Y -W K A -K A A N A Q G K I T A L (60)
M+ + + I E + L + E ++ + L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V -M V T -Y D L I G K Q L A S R R A E L
MGV-GENOME-0245073_CDS_0003 N D V L D W I E ----W -N I I --K -E (82)
++L+ I
AcrIE6 I E I L E E Q Y P G H A A D L S I K N L C P
MGV-GENOME-0245073_CDS_0003 2 AcrIE1 0.68 View Alignment MGV-GENOME-0245073_CDS_0003 M -S ---L -V -S -K -I -K -------N -E -I -------Q E -------A E K -K I I -L C N A Q L L (60)
M + L+
AcrIE1 M E K K L S D A -Q -V -A -L -V A A W R K Y P D -L -R E S L E E A A S I L S L I V F Q A E T -L S D -Q A N E L A
MGV-GENOME-0245073_CDS_0003 E A V E R E D E P S C C Y W K A K A A N A Q G K I T A L N -D V L ---D W I E W N I -I K --E (109)
+ R + K + +V + + + +
AcrIE1 N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0245073_CDS_0003 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0245073_CDS_0003 M S -L V S ---K I K -------------N E I Q -E ----A E K K I I -L C N A Q L L -E A V --E R E D E (60)
M S I + K ++ ++
AcrIIC4 M K I T S S N F A T I -A T S E N F A K L S V L P K N H R E -P I K G L F K S A V E -Q F S S A R D F F K N E N -Y --
MGV-GENOME-0245073_CDS_0003 P S C -C Y W K A K A -A -N A Q G K I T A L N D V L D W I E W N I -I K E (98)
S ++ + L+ ++D +E + I
AcrIIC4 -S -K E L A E K F N K -E A V N E A V E K L Q K A I D L A E K Q -G I Q F
MGV-GENOME-0245073_CDS_0003 4 AcrIF23 0.58 View Alignment MGV-GENOME-0245073_CDS_0003 M S L V S -K I ---K --------N E ----I ---Q -----------------------------(60)
M+ + + +
AcrIF23 M T N F Q T W L D S A -D I P V Q Q N G Q W I D L E T G I A -Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0245073_CDS_0003 -------------E ------------A ----E K K I I L C N A Q L L E A V E R E D E P S C C Y W K A K (120)
E + LL A+ E
AcrIF23 F G G R A L T G T A R Q K E W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R -N D S A Q E
MGV-GENOME-0245073_CDS_0003 A A N A Q G K I T A L N ------------D V -L -D W I ---E W N I I K ---E (165)
+A AL D I +
AcrIF23 I A G F V M Q Q K A L L A Q H R S A K A A G Q A D -K -V A K I A A E Y N A L T A R W G F
MGV-GENOME-0245073_CDS_0003 5 AcrIC3 0.56 View Alignment MGV-GENOME-0245073_CDS_0003 M S -L V S -K I K ----------N -E -I Q -E A E -------K ----K I I L C N --------A -Q L (60)
MS V+ +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S -V -V A S S -G Q V K F M A D K T D R G L E S R -F L V P E A G N -R R -
MGV-GENOME-0245073_CDS_0003 -L -E A V E R E D -E P S C -C Y W K A K -A A N A Q G K -I T A L N ----D V L D W I E W -N I I K E (114)
A+ D E AA++ I ++
AcrIC3 I -E V A L T G R D L E A A -N -A L F S E L A A S V E -A T N E M Y -R E L D A E R A Q I N -K -A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;