3D Structure for MGV-GENOME-0244939_CDS_0071 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 90.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0244939_CDS_0071 1 AcrIB1 0.82 View Alignment MGV-GENOME-0244939_CDS_0071 M D E Y R E Q -R I -S A N L -L T E ----D -P D L S K F Q --N -D N G S I N E K I R S S Y F S I I R -R R G F A (60)
M+ + + I ++ +
AcrIB1 M E S K N L R K L L N E Y E -E -I D I N E M -L K N F R S I K N S -G T K N D I E I F L H E K A I K F E K S S I S S T
MGV-GENOME-0244939_CDS_0071 Y S V -S L N G E I V G Y Y M L K V I -S I -A P E D D -E I Y D ----D S ----------D S L E Y A A I F L D (120)
Y V S EI+GY + + E + L L
AcrIB1 Y V V F S E D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K -L G N S A A I L K N G D L M T S S F L L G
MGV-GENOME-0244939_CDS_0071 Y I V V D T R -F R -K R G I G S N I L K G I I S F T K T V I N Q L P I R F L A L K A --L Q D R K E W Y E K H G F R A (180)
+ G +L + + + ++ + L +Y GF+
AcrIB1 Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F K M
MGV-GENOME-0244939_CDS_0071 I E D S ---D -S P I M L I D F L D K S -E -I D -K Y F R (211)
+E + +
AcrIB1 L E S L T S E E G -L -------K --V -M -I M -E L K
MGV-GENOME-0244939_CDS_0071 2 AcrVA5 0.59 View Alignment MGV-GENOME-0244939_CDS_0071 M D E Y R E Q -R I S A N L L T E ---D P D L S K F Q N D N G S I N E K I R S S Y F S I I R R R G F A Y S V S L N G E (60)
M E +
AcrVA5 M -K I -E -L -S G -G Y I C -Y S I --------------------E -------------------
MGV-GENOME-0244939_CDS_0071 I V G Y Y M L K V I S I A P E D D E I Y D D S D S L E Y A A I F L D Y I V V D T R F R K R G I G S N I L K G I I S F T K (120)
E + +D + V ++ GIGS+++ + +
AcrVA5 --------------------------E -D E V T I D M V E V T -T -K R Q G I G S Q L I D M V K D V A R
MGV-GENOME-0244939_CDS_0071 T V I N Q -L P I R F L A L K -A -------L Q D R K E W Y E K H G F R A I E D S D -S P I M L I D F L D K S E I D (180)
+ L D E+Y F D
AcrVA5 E ----V --G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y D P D D V D -G R L M ------R ---
MGV-GENOME-0244939_CDS_0071 K Y F R (184)
AcrVA5 W --S
MGV-GENOME-0244939_CDS_0071 3 AcrIA1 0.43 View Alignment MGV-GENOME-0244939_CDS_0071 M D E Y --R ---E Q -------------R I S A N L ---L -T -E ---------D P D ---------(60)
M + +
AcrIA1 M R S K M I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K -V -E F E W C V K Q K E E L E -V E D A E K S V M
MGV-GENOME-0244939_CDS_0071 ------------------L -S K -F -Q N -D ---N G S I N E K I R ------S ------------ (120)
+ + + + +
AcrIA1 L D Y A L F G N C A I P K V T A E E Y K N -S -L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E L S
MGV-GENOME-0244939_CDS_0071 -----S -----------------------------Y -F S I I R -R R G F A -Y S V S L ---N -G (180)
+ + V+
AcrIA1 R C L R R -S Y L M R K E G K T K V G L N E A M K M H I G S G L H M R L Q S L L R -K H G F E T E V R V Q R K T A L G F
MGV-GENOME-0244939_CDS_0071 E I V G Y Y M -L K V I S I A P E D D E I Y D D S D S L E Y A A I F L D Y I V -V D -T R F R -K R -G I G S -N I L K (240)
IVG E + I + + N
AcrIA1 Q I V G R I D V Y -D K --------E -------E N V -I Y E --L K Y -T H N D K -L -D S V R -L N N -Y L
MGV-GENOME-0244939_CDS_0071 -G I I S -F T K T V I N Q L -P I R F L A L K -A -L Q D R K E W Y E -K H G F R A I E D S D S P I M L I D F L --- (300)
++ + + L + + + +
AcrIA1 R Q -L N Y Y I E -M A ---N -A M K G Y L V I V H A D G --S V E -E I K R D W -A ----E T D L E K R A N A F G
MGV-GENOME-0244939_CDS_0071 ----D K S ---------------E -I D -K Y --F R (333)
+ +
AcrIA1 I Y V E E N T L P P K K S R P D A E C I E C P F -Y N F C W G K L
MGV-GENOME-0244939_CDS_0071 4 AcrIC11 0.40 View Alignment MGV-GENOME-0244939_CDS_0071 M D E Y -R E Q R I S A N L L T E D -P D L S K F Q N D -N G -S I N E K I R S S Y F -S I I R -R -R -G F A Y S V S (60)
M + + LSK + ++ +
AcrIC11 M N K E T Q I T A S A V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L -A K V P I E W T R L Q Y Y -
MGV-GENOME-0244939_CDS_0071 L -N G E I V G Y Y M -L K V I S I A P E D D E I Y D -D S D S L E Y A A I F L D Y I V V D T R F R K R G I G S -N I -(120)
+ G Y + + + A+ + +
AcrIC11 T L S -N -S G F Y L A -P R -E L R I S E -C --E L ----S A D A V G I V A T M L T L R ---------Q L -A
MGV-GENOME-0244939_CDS_0071 L K G I I S F T K T V I N Q L P I R F L A L K A L -Q -D R K E W Y E K H G F R A I E D S D S P I M L I D F L -D -K -(180)
+ + ++ P+ LA+ A Y + +
AcrIC11 -H E S A A C V E A D -S T Y P A A K L A V T A -S -V K F A Q Q Y H H L A A Y S V K ----H -----A -E -S -I
MGV-GENOME-0244939_CDS_0071 S E -I D K Y F R (189)
+
AcrIC11 -N I Y -R A I D
MGV-GENOME-0244939_CDS_0071 5 AcrIIC3 0.39 View Alignment MGV-GENOME-0244939_CDS_0071 M D E Y R -E Q R I S A N L L T E D P D L S K F Q N D N -G S I N -E -K -I -R -S -S -Y F S I I R -R -R G F A Y (60)
M R S N I + R
AcrIIC3 M -F K R A I I F T S F N G F E --K V S R T E K R R L A -K I I N -A -R -V -S -I -I D E Y L -R A -K -D T N A
MGV-GENOME-0244939_CDS_0071 S V S L N G E I V G Y Y M L K V I S I A P E D D E I Y D D S D S L E Y A A I F L D Y I V V D T R F R K R G I G S N I L K (120)
S+ G + + L
AcrIIC3 S L --D G Q Y R A F L -F --N -D ----------------------------E ---S P A M T E F L A
MGV-GENOME-0244939_CDS_0071 G I I S F T K T V I N Q L P I R F L A L K -A L -Q D R -K E W Y E K H G F R A I E D S D S P I M L I D F L D K S E I D (180)
+ F + + + + + K EI
AcrIIC3 K L K A F A E S C ---T -G I S I D A W E -I E E S E Y V R L ----P V -----E R R D F L A -A A N G K -E I -
MGV-GENOME-0244939_CDS_0071 K Y -F -R (186)
AcrIIC3 --F -K I
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;