3D Structure for MGV-GENOME-0241871_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0241871_CDS_0036 1 AcrIIA27 0.71 View Alignment MGV-GENOME-0241871_CDS_0036 M N E D K N L R E F E V P --V T --------W Q V -S A S V V V A A E T K E E A M K E A I K L E E E G I F I L P N (60)
M F + + V ++ V A ++ EA K A F
AcrIIA27 M -K -----T F N I I V S E S A N L K E H S S E L V D N I I Y K V E A K N R R E A F K K A R E E ---Y S F -S S K
MGV-GENOME-0241871_CDS_0036 N D Y Y I D G T -F R V -Y R N I D F -------V -E D I G S Y Y (95)
+
AcrIIA27 W K F N M R D -L T A -I D N -T H R R A W G R R Y -L -R V E E -A
MGV-GENOME-0241871_CDS_0036 2 AcrIE2 0.64 View Alignment MGV-GENOME-0241871_CDS_0036 M N E D K -N -L R E -F E V P -V T W Q V S A S V V V A A E -T K E E A M -K E A I K L E E E G I F I L P N N D Y Y I (60)
MN + + V + A K A + EG+ + +
AcrIE2 M N T Y L I D P R K N N D N S -G E R F -T V D A V D I T A -A A K S A A -Q Q I L G E E -F E G L V Y R E T G E S N G
MGV-GENOME-0241871_CDS_0036 D G T F R V Y R N ---I D F -V E D ----I ---G S Y Y (91)
G F +Y+
AcrIE2 S G M F Q A Y H H L H G T N R T E -T T V G Y P F H V M E -L
MGV-GENOME-0241871_CDS_0036 3 AcrIIA33 0.57 View Alignment MGV-GENOME-0241871_CDS_0036 M N -E D -K -N L R E ----------F E V P -V T ---W Q -V S A S V V -V A A E -----T K E -E -A M K (60)
M K + + + T +
AcrIIA33 M I K W T G K S T D K G W I R T V E A E T Y Y K L -L E T L V D K G Y -I G D Y I D S D S -Q L F H E L -A Y -V -S P
MGV-GENOME-0241871_CDS_0036 E A -I -K L E E E G I F I L P N -N D Y Y I D G T ------F R V -Y R N -------I -D F ----------(120)
L E+ + + ++ F R
AcrIIA33 A -V -A D L -E D R L -----N D E H Q V E Q A L E D L E N F D -W N R -V F E K L T D -Q --Q F Q T A I A G C T
MGV-GENOME-0241871_CDS_0036 ----V -E D -I -G S Y Y (135)
AcrIIA33 S Q A Y -Y Q -E -F E V I E
MGV-GENOME-0241871_CDS_0036 4 AcrIE8 0.56 View Alignment MGV-GENOME-0241871_CDS_0036 M N E D K N L R E F E V P V T W Q V S A -S -V V V A A E T K E E A M K E A I K L E E E G I F I L P N N D Y Y I D G T F (60)
M + + EEA + +EE D Y D
AcrIE8 M -T -----T I T I N T -Y -D -P E A R F N ---M S G E E A K E F F A F V E E Q A K V S --G F D V Y Y D S C T
MGV-GENOME-0241871_CDS_0036 R V Y R N -I D F V E D -I G S Y Y (78)
V FVE Y
AcrIE8 Y V D E E S E R F V E K C F Q -N Y
MGV-GENOME-0241871_CDS_0036 5 AcrIIA20 0.55 View Alignment MGV-GENOME-0241871_CDS_0036 M N E D K N L R E F E V P -V T W Q V S -A S V V V A A E T K E E A M K E A I K L E E E G I F I L P N -N D -Y Y I D G (60)
M EV +ET A I N ID
AcrIIA20 M -K -----N Y E V T N E --V -K N -L -N T Q V E T I G Q A V D L Y K E Y G S N T I V W S I D K N -E D L I D E
MGV-GENOME-0241871_CDS_0036 T F R V Y R N -I -D F -V E D -I G S Y Y (82)
+ +
AcrIIA20 V T E ---L V -A -E Y A -E K G T V I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;