3D Structure for MGV-GENOME-0238709_CDS_0022 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.23 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0238709_CDS_0022 1 AcrIE1 0.71 View Alignment MGV-GENOME-0238709_CDS_0022 M T L Q E F R E R T A L A P T P E E Y N Q I E D I Y L A T G N L D K D E F C K D Y K I H H Q S S I I A -A L Y K Q N E K (60)
M + ++ + + ++ + +
AcrIE1 M -E K K L S D A Q V -----A ----L V A A W R K -Y P D L R E -------------S L E E -A A S I L S L
MGV-GENOME-0238709_CDS_0022 L K E K C D T F R E G N N K M I D F L L E R A Q V F G D I N L -L H K A -I N M -I G H A G V I K R K I V L E -L P F W (120)
+ +T + N + + + + + + +
AcrIE1 I V F Q A E T L S D Q A N E L A N Y I R R Q -G L E E A E G -A C R -N I -D I M R A K W V E V C G E V N Q -H G -I -
MGV-GENOME-0238709_CDS_0022 D I D K E Y I K D N I E (132)
+ + I ++
AcrIE1 R V Y G D A I D R D V D
MGV-GENOME-0238709_CDS_0022 2 AcrIIA11 0.58 View Alignment MGV-GENOME-0238709_CDS_0022 M T L Q E F R E R T A L A P T P E E Y N Q I E D I Y L A T G N ---L --D K D E F C K D Y K I H H Q S S I I A A L Y K (60)
M R + + + G + + I +L
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W -F C -D ----D K A L A G R L A K I W G I L K G
MGV-GENOME-0238709_CDS_0022 Q N -E K L K E K C D T F R E ----G N N K M I D F L L E ------R -------A Q ----V --F ------(120)
+ + + + + D + +
AcrIIA11 I T S D Y I L D N Y R V W F K N N C P M V G P L Y D D V R F E P L D E E Q R D E L Y F G V -A I D D -K R R E K K Y V I
MGV-GENOME-0238709_CDS_0022 ----G ---D ---I N L L H K A I N M I G H A G V -I K R K I V L E L -P F ----W D -I ----------- (180)
N ++ + + I +K +
AcrIIA11 F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E E F Y K A R E K K R Q E M -E -E A N N K F A E I M Q
MGV-GENOME-0238709_CDS_0022 D -K -E -Y I K D N I -E (194)
+ +
AcrIIA11 R A -D -E I L W N L K E D
MGV-GENOME-0238709_CDS_0022 3 AcrIIA19 0.57 View Alignment MGV-GENOME-0238709_CDS_0022 M T L Q E F R E R T A L A P -T P E E Y N Q I E D I Y L A T G N L D K D E F C K D Y K I H H Q S S I I A A -L -Y -K -(60)
M L E Y ++ +T H+ +
AcrIIA19 M K L -I -V E V -----E -E T N Y K N L V N Y T K L T N E ------------S H N I L V N R -L -I -S -E
MGV-GENOME-0238709_CDS_0022 Q N E K L K E K C D T F -R E G N N K M I D F L L E R -A Q V F G D I N L L H K A I N M I G ---H ------A G V I (120)
K E +N+ + +L + + ++
AcrIIA19 Y I T K P Y E L R L D L S E R Y S N R D L I E F K F M L -I E -Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V
MGV-GENOME-0238709_CDS_0022 K R K I V L E L P F W D I --------D -K -E -Y I K D N I E (154)
R + E+ + +
AcrIIA19 F R Q L F E E V I S N P D T V L K A F H S -Y -T -S F L E E -N K
MGV-GENOME-0238709_CDS_0022 4 AcrIE6 0.57 View Alignment MGV-GENOME-0238709_CDS_0022 M T L Q E F R E R T A L A P T P E E Y N Q I E D I Y L A T G N L D K D E F C K D Y K I H H Q -S S I I A A L Y K Q N E K (60)
M+ ++ Q A DE Y
AcrIE6 M N -N D T E V -L --E ---Q ---Q ----I K A F E L -L A D E L K D R L P T L E I L ----S P M Y T A V M V
MGV-GENOME-0238709_CDS_0022 -L K -E -K -C -D -T F R -E G -N N K M I D F L L E R A Q V F G D I N L L H --K A I N M I G H A G V I K R K I V (120)
+ +LE ++
AcrIE6 T Y -D -L -I -G -K -Q L A -S R R A -E L I E I L E E ---Q -----Y P G H ---------------A A
MGV-GENOME-0238709_CDS_0022 L E L P F W D I D K E Y I K D N I E (138)
+L IK
AcrIE6 -D L ------S --I K N L C P
MGV-GENOME-0238709_CDS_0022 5 AcrIF23 0.56 View Alignment MGV-GENOME-0238709_CDS_0022 M -T L Q E F R E R T A L A P T P E E Y N Q I E D I Y L A T G N -L D K D E -F C K -D -Y K I ----------H H (60)
M + Q + + + + + + + +
AcrIF23 M T N F Q T W L D S A D I P V Q -Q ----N G Q W I D L E T G I A Y D P S Y N Y A A N T R R -A S L S P R G I D A R A
MGV-GENOME-0238709_CDS_0022 Q S S I I A -A L Y K Q N E K L K E K C D T F R E G N N K M I D F L L E R A Q V F G D I N L L H K A I N M I G H A G V -(120)
+ + + KE + R LL A I
AcrIF23 V A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C -D P S G L L T A A K F W I E N R N D S
MGV-GENOME-0238709_CDS_0022 ------I -K R K I V L E L P -F -W D I -------------D K E Y I K D N ---I -E (170)
L
AcrIF23 A Q E I A G -F -V M Q Q K A L L A -Q H R -S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;