3D Structure for MGV-GENOME-0235629_CDS_0044 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.30 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0235629_CDS_0044 1 AcrIE1 0.72 View Alignment MGV-GENOME-0235629_CDS_0044 M N I E K L Y M F N P F K I Q N A S N E E I A N -T -Y M -N -L -Q -N -K I I Q E A D T C Y L L S E N I E I Y S N -(60)
M KL + D L E +
AcrIE1 M E -K K L S D -A Q -----------V -A -L -V A -A -W -R -K ----Y P D L R E S L E E ----A A S I
MGV-GENOME-0235629_CDS_0044 M N -Y -L V G -E M I A R I Q Q Q Y D I L K T K I S I K E N K Q I Y Q S R K D W Q K E N S E K A P A M S Y F E A I A K (120)
+ + ++ Q L + I +
AcrIE1 -L S -L -I V F -Q A E T L S D Q A N E L A N Y I R ---R -----Q ----G ---L --------------
MGV-GENOME-0235629_CDS_0044 E T V E T E C E E L A K L G A R L F R F K K A Y E S I D S K Q N -A L -K K K I E -A I R Y E -I (169)
E + + + + + N + AI +
AcrIE1 E ---E ----A E G A C R N I D I M R A K W V E V C G E V N Q H -G I R V Y G D A I D R D V D
MGV-GENOME-0235629_CDS_0044 2 AcrIE6 0.66 View Alignment MGV-GENOME-0235629_CDS_0044 M N I E K L Y M F N P F K I Q N A S N E E I A N T Y M N L Q N K I I Q E A D T C Y L L S E N I E I Y S N M N Y L V G E M (60)
MN + E + +
AcrIE6 M N ------N D ----T ----E V L E -Q ------Q ----------------------------
MGV-GENOME-0235629_CDS_0044 I A R I Q Q Q Y D I L K T K I S I K E N K Q I Y Q S -R K D W Q K E N S E K A P A M S Y F E A I A K E T V E T E C E E L (120)
I D LK ++ + +
AcrIE6 I K A F E L L A D E L K D R L P ---------T L -------E I ----L ----S ----P M Y T A V M V T Y
MGV-GENOME-0235629_CDS_0044 A K L G A R L F R F K K A Y E -S -I D -S K Q N A L K K K I E A I R Y E -I (159)
+G L + + I+
AcrIE6 D L I G K Q L A S R R A E L I E -I -L E E Q Y P G H A A D L -S I K N L C P
MGV-GENOME-0235629_CDS_0044 3 AcrIC3 0.59 View Alignment MGV-GENOME-0235629_CDS_0044 M N I E K L Y M F N P F K -I Q N A S N E E I A N T Y M N L Q N K I I Q E A D T C -Y L L S E N I E -I Y S -N M N -Y (60)
M+ N + E L + S +
AcrIC3 M S -------I Q V T S T ----N ---G -------R T V N L E ----I -E L G S V V -A -S S G Q -V K -
MGV-GENOME-0235629_CDS_0044 -L V G -E M I A R I Q Q Q Y D I L K T K I S -I K E N K Q I Y Q S --R -K D W Q K E N S E K A P A -M S Y -F E -A (120)
A
AcrIC3 F -M A D K T ---------------D R G L -E S R F -L V P E -A -----------G -N R R -I E -V A
MGV-GENOME-0235629_CDS_0044 I A K E T V E T E C E E L -A -K -L -G -A R L F -R F K -K -A -Y -E -S I D S K Q N -A L K -K K I E A I R Y E (180)
+ +E + L + I +
AcrIC3 L T G R D L E ----A A N -A -L -F -S -E L A A -S V E -A -T -N -E -M Y R E L D A -E R A -Q I N K A L E -
MGV-GENOME-0235629_CDS_0044 I (181)
AcrIC3 G
MGV-GENOME-0235629_CDS_0044 4 AcrIIA11 0.58 View Alignment MGV-GENOME-0235629_CDS_0044 M N I E K ---L Y M -F --N P --F -K -I -----Q N ------A --S N E E I A N T Y M N L Q N K I I -Q E (60)
M +A + +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K -D -R E T Q I E A G W Y D W F -C D -D K A L A G R L A K I W G I L K G -I
MGV-GENOME-0235629_CDS_0044 A D T C -Y L L -S E N I -E I Y S ---N M N Y L V G E M I -A -------R I Q -Q Q Y D -I L K -T K I S I --(120)
+ M + + +
AcrIIA11 -T -S D -Y I L D N -Y R V W F K N N C P M V G P L Y D D -V -R F E P L D E E Q -R D E L Y F G V -A I D D -K R R
MGV-GENOME-0235629_CDS_0044 K E N K Q I Y Q S R K D -W Q K -E -N S E K A P A M S Y -F E -A -I A K E -T V -E T E C -E E L -A K -L -G A R (180)
I + + E + + E
AcrIIA11 E K K Y V I F T A -R N D Y E -N E C G F N N V R E V R Q F -I N -G -W E D E L K N ----E -E F Y K -A -R E K -
MGV-GENOME-0235629_CDS_0044 L -F R F -K K A Y E S I D S K Q N A L K K K I E A I R Y E I (211)
A + + + ++
AcrIIA11 K R Q E -M E E A N N K F A E I M Q R A D E I L W N L K E -D
MGV-GENOME-0235629_CDS_0044 5 AcrIF23 0.56 View Alignment MGV-GENOME-0235629_CDS_0044 M -N I E K -L Y M -------F N P ----F ------------K ---I -----Q N -----------(60)
M N L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R -G I D A R A V A K T F
MGV-GENOME-0235629_CDS_0044 ------A -S N -E E I A N T Y M N L Q -N K I -I Q E A D T C Y -L -L S E -N -I -E I Y S -N M N Y L V G E M (120)
+ + Q +
AcrIF23 G G R A L T -G T -A -R Q K E W A E K I R A -E K V Q Q ----M N Q -D -Q A E -M -A ----C -D -------
MGV-GENOME-0235629_CDS_0044 I A R I Q Q Q Y D I -L K T K I S -I K E N K Q I Y Q S R K D W Q K E N S E K A P A M S -Y F E -A -I -A K E T V E T (180)
+ + K + +++
AcrIF23 ---P ----S G L ----L -T A A ---------K --------------F -W I E -N -R -N D S A Q E
MGV-GENOME-0235629_CDS_0044 E -C E E L A K L G A -R L F -R F K K -A -Y -E S I D -S K Q N A L K K K I E A I R Y -E -I (229)
+ L ++ K + A+
AcrIF23 -I A G -F V M Q Q K A -L L A -Q H R S -A -K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;