3D Structure for MGV-GENOME-0235198_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 95.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0235198_CDS_0009 1 AcrIE6 0.90 View Alignment MGV-GENOME-0235198_CDS_0009 M K Y Q T L V Q I Y E A L T D D L K A A E K S -L E L T T S A L K K A D P -D -G K ----L -T S G A L V D V R K K A (60)
M + + E ++ L + T ++
AcrIE6 M -N N D -T E V L E Q Q I K A F E L L A D E L K -D R L P T L E I L S -P -M Y -T A V M -V T Y D L I G K Q L A S R
MGV-GENOME-0235198_CDS_0009 F D R V C -R L R D A L D ---D -F N -S -Q -E -W (88)
+ L +
AcrIE6 R A E L I E I L E E Q Y P G H A A D L -S -I K N L C P
MGV-GENOME-0235198_CDS_0009 2 AcrIE1 0.85 View Alignment MGV-GENOME-0235198_CDS_0009 M -K -Y Q ----T -L -V -Q -------I --------Y -E -A -L -T D -D -L -K -A A E K -S L E L T (60)
M K + +
AcrIE1 M E K K L S D A Q V -A -L -V -A A W R K Y P D L R E S L E E A -A -S -I -L -S L -I -V -F -Q A E T L S D Q -
MGV-GENOME-0235198_CDS_0009 T S A L K K -A D P D G K L T S G A ----L V -D -V R K K A F D R V C -R L R -D -A -L -D D F -N ---S -Q -(120)
+ L + G + R K + +
AcrIE1 A N E L A N Y I R R Q G L E E A E G A C R N I -D -I M R A K W V E V C -G E V -N -Q -H -G I R V Y G D A I -D -R
MGV-GENOME-0235198_CDS_0009 -E W (123)
AcrIE1 D V D
MGV-GENOME-0235198_CDS_0009 3 AcrIF15 0.84 View Alignment MGV-GENOME-0235198_CDS_0009 M K Y Q T L V Q I Y E A L T D D L K A A E K S L E L T T S A L K K -A D ---P D G K -L -T S G A L V D V R -K -K A (60)
M T+ +YE+ +D + + +E + ++ + G +
AcrIF15 M T --T I T I A Y E V S N D K V E T I K T M V E S Q --Q I H -N V N F N G --E E F T I E R G D F T S I -D -K -D
MGV-GENOME-0235198_CDS_0009 -F D R V C R L R D A L D D F N -S Q E W (81)
+L + D
AcrIF15 E -A E H V K L L N K I Q D I I H -G Y S
MGV-GENOME-0235198_CDS_0009 4 AcrIIA34 0.83 View Alignment MGV-GENOME-0235198_CDS_0009 M K --Y Q T L V ----Q ----------I -----------Y E -------A L T D -D L K A ----A E (60)
MK + +
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S -I M R K I K A L T D Q F -E T M D D L I D S L N S -Y A D T H Y T W A
MGV-GENOME-0235198_CDS_0009 K S L E L -T T S A L K K A D P ---D -G K ----L -------------T S G A L V D V R K -K A F D R V C R (120)
+ ++ + +
AcrIIA34 I T Y F -Q L A R I I I S F Q A S N N T T S -E K K I D L Q S G P I E V N G K L K I R V T V D E F M -A -D L A N W -E
MGV-GENOME-0235198_CDS_0009 L R D A L D D F N S Q E W (133)
+ +
AcrIIA34 H L E D I K K L A K E L A
MGV-GENOME-0235198_CDS_0009 5 AcrIIA33 0.83 View Alignment MGV-GENOME-0235198_CDS_0009 M K ---Y Q -T L V -----Q --------I -Y E ------------A --------L -T -D -D -L -(60)
M T + E
AcrIIA33 M I K W T G K S T D -K G W I R T V E A E T Y Y K -L L E T L V D K G Y I G D Y I D S D S Q L F H E -L -A -Y -V -S
MGV-GENOME-0235198_CDS_0009 ---K -A A E K S L E L T T S A L K K A D P -D -G K -L -T S G A L V D V R K K -A F D R V C R L R -D A -L D D F (120)
+E L + A + + + +
AcrIIA33 P A V -A D L E D R L N D -E H Q V E Q A L E D -L E N F -D W N R V F E K L T D Q Q F Q T A I A G C T S Q -A Y Y Q E
MGV-GENOME-0235198_CDS_0009 N S Q E W (125)
AcrIIA33 F E V I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;