3D Structure for MGV-GENOME-0235198_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.37 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0235198_CDS_0009 1 AcrIE6 0.72 View Alignment MGV-GENOME-0235198_CDS_0009 M K Y Q T L V Q I Y E A L T D D L K A A E K S -L E L T T S A L K K A D P -D -G K ----L -T S G A L V D V R K K A (60)
M + + E ++ L + T ++
AcrIE6 M -N N D -T E V L E Q Q I K A F E L L A D E L K -D R L P T L E I L S -P -M Y -T A V M -V T Y D L I G K Q L A S R
MGV-GENOME-0235198_CDS_0009 F D R V C -R L R D A L D ---D -F N -S -Q -E -W (88)
+ L +
AcrIE6 R A E L I E I L E E Q Y P G H A A D L -S -I K N L C P
MGV-GENOME-0235198_CDS_0009 2 AcrIE1 0.66 View Alignment MGV-GENOME-0235198_CDS_0009 M -K -Y Q ----T -L -V -Q -------I --------Y -E -A -L -T D -D -L -K -A A E K -S L E L T (60)
M K + +
AcrIE1 M E K K L S D A Q V -A -L -V -A A W R K Y P D L R E S L E E A -A -S -I -L -S L -I -V -F -Q A E T L S D Q -
MGV-GENOME-0235198_CDS_0009 T S A L K K -A D P D G K L T S G A ----L V -D -V R K K A F D R V C -R L R -D -A -L -D D F -N ---S -Q -(120)
+ L + G + R K + +
AcrIE1 A N E L A N Y I R R Q G L E E A E G A C R N I -D -I M R A K W V E V C -G E V -N -Q -H -G I R V Y G D A I -D -R
MGV-GENOME-0235198_CDS_0009 -E W (123)
AcrIE1 D V D
MGV-GENOME-0235198_CDS_0009 3 AcrIIC4 0.63 View Alignment MGV-GENOME-0235198_CDS_0009 M K -Y -Q -T L V -Q ---------------I -Y -E -A -L T D D L K A A E K S L E L T T S A L K K A D P D (60)
MK + + + K A + K +
AcrIIC4 M K I T S -S N -F A T I A T S E N F A K L S V L P K N H -R -E -P I K G L F K S A V E Q F S S A R D F F K -N E N -
MGV-GENOME-0235198_CDS_0009 G K L T S G A L V D V R -K -K A -F D R V C R L R D A L D D F N S Q ---E W (100)
+ ++ + V +L A+D Q +
AcrIIC4 --Y S K E L A E K F N K -E A -V N E A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0235198_CDS_0009 4 AcrIF23 0.58 View Alignment MGV-GENOME-0235198_CDS_0009 M -K Y Q T L V ---Q ----------------I Y E -----------------------------(60)
M QT + +Y
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y -D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0235198_CDS_0009 ----------------A L -----------T D D L K A A E K S -L E -L T T S A L K K A D P D G K --- (120)
+ + + + D
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L -L T A -A K F W I E N R N D S A Q E I
MGV-GENOME-0235198_CDS_0009 -L ---T S G A L V D ----V R K -K -A F D R V C R L R D A L D D F N S Q E -W (163)
++ AL+ ++ D+V ++ + +
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A -G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0235198_CDS_0009 5 AcrIC3 0.56 View Alignment MGV-GENOME-0235198_CDS_0009 M K Y Q T ---L -V -Q ------I Y E ---A L T D D L -K -A A E -K S L E L -T T S A L -K K -A D -P -D G (60)
M Q A + + A K+ +
AcrIC3 M S I Q V T S T -N -G R T V N L E I E L G S V V A S S G Q V K -F M A -D K T -D R G -L E S R F -L V P -E -A G N
MGV-GENOME-0235198_CDS_0009 K ------------L ----T S G A L V D V R K K A F D R V C -R L R D A L D D F N S Q -E W (111)
+ L+ + L N E
AcrIC3 R R I E V A L T G R D L E -A A N A L F S E L A A S V E A T N E M Y -R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;