3D Structure for MGV-GENOME-0234429_CDS_0032 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.09 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0234429_CDS_0032 1 AcrIE6 0.74 View Alignment MGV-GENOME-0234429_CDS_0032 M E E I D D Y V M N V L Q K C L N V P P L A F G A N T V E P Y K E L Q Y I T Q T T S Y I C Y L Y N M Y K I N K H N L K E (60)
M + + I K L
AcrIE6 M N ---N D T E V L E ----Q ---------------Q ----------I K A F E L L A D E L K D R L P T
MGV-GENOME-0234429_CDS_0032 Y K ---D D K E T L T E I K R R M S E Y L D E I Q E K C E -E L -E G F Y ----N -K R V E -E G W -N (114)
+ L E Y
AcrIE6 L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I -L E E Q Y P G H A -A D L S I K N L -C P
MGV-GENOME-0234429_CDS_0032 2 AcrIE1 0.70 View Alignment MGV-GENOME-0234429_CDS_0032 M E E I -D D Y V M N V -L Q K C L N V P P L A F G A -N -T V -E P Y K E L Q Y I T Q T T S Y I C Y L Y N M Y K I N K (60)
ME D + + L + + S I +
AcrIE1 M E K K L S D A Q V -A L V A A W R K -Y ----P -D -L -R E ----S L E E A A S I L S L I V F Q A E T L S D Q A
MGV-GENOME-0234429_CDS_0032 H -N L K E Y K -D -D K E T L T E I K R R M S E Y L D E I Q E K C E ---E L E G -F -Y N K R V E E G W N (115)
+ + E + + R E C Y ++
AcrIE1 N E L A N Y I R R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V Y G D A I D R D V D
MGV-GENOME-0234429_CDS_0032 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0234429_CDS_0032 M E E I D D Y V M N V L Q K C L N V P P L A F G A N T --V E P Y K E L Q Y -I T Q -T T S Y I C Y L Y N M Y K I N K H (60)
M +++ + A P + +
AcrIIC4 M K I T S S N F A T I A ----T S E N ---F A K L S V -L P K N ----H R E -P I K G L F K S A V E Q F S S A R D
MGV-GENOME-0234429_CDS_0032 N L K E Y K D D K -E -T L T E I K -R R M S E Y L D E I Q E K C E E L E G F Y N K R V E E G W -N (110)
K + E+ + E + E+ EK + K
AcrIIC4 F F K ---N E -N -Y -S K E L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I ---Q F
MGV-GENOME-0234429_CDS_0032 4 AcrIC3 0.60 View Alignment MGV-GENOME-0234429_CDS_0032 M E E I D --D -Y V M ---N V ---L Q K C L -N V P P L A F G A -N T V E P Y K E L -Q Y I T Q T T -S Y I C Y L (60)
M I N+ L + + + F A + E + +
AcrIC3 M S -I Q V T -S T N G R T V N L E I E L G S V V A S S G Q V K F M A D -K T D R G L E S R F L V P E A G N R R -I E V
MGV-GENOME-0234429_CDS_0032 Y N M Y K I N K H N L K E Y K D D K E T L T E I K R R M S E Y L D E I Q E K C E E L E G F Y N K R V E E -G W N (116)
++ D E ++ + ++ +E EL+
AcrIC3 A ----L T G -------R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L -E G
MGV-GENOME-0234429_CDS_0032 5 AcrIF23 0.56 View Alignment MGV-GENOME-0234429_CDS_0032 M E E I D D Y V ---M N V L ---Q K C L N ------------V ---------P P -L A -F -G A -----(60)
M + + + P
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G -I -D A -R A V A K
MGV-GENOME-0234429_CDS_0032 ----N T V -----E P --------Y K E L Q Y I T Q T T S Y I C Y -L Y N -M Y K -I N K H N L K E Y K D D K (120)
+ +Q +Q + + + K + D
AcrIF23 T F G G R A L T G T A R Q -K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L -L T A A K F W I E N R N D S A
MGV-GENOME-0234429_CDS_0032 ---E T L T E I K R R M S E Y L D E I -Q -----E K C E E L E G F Y N K R V E E G W N (166)
+ + +K + YN
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K -A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;