3D Structure for MGV-GENOME-0233054_CDS_0007 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 82.47 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0233054_CDS_0007 1 AcrIIA34 0.80 View Alignment MGV-GENOME-0233054_CDS_0007 M C E Y ---C -E -K I I N ----N -K K ---I -L D I -----D N E --D K N --------Y -I -S K K -(60)
M I + +
AcrIIA34 M K N I A N E -I -K T I R Y A F E D -G R S T Q K S I M R -K I K A L T D -Q F E T -M D D L I D S L -N -S Y A -D
MGV-GENOME-0233054_CDS_0007 K I E -D -T -I E -E L K G K L K D I S K R R E K S K ------------T K ---E E ---K -T -V L W C L E (120)
+ ++ I +
AcrIIA34 T H -Y -T -W A -I T Y F Q L A R I I I S F Q A S N N T T S E K K I D L Q S G P -I E V N G K L K I R -V -T V D E F
MGV-GENOME-0233054_CDS_0007 I R T D ------E R I K T L Q E -L L (141)
E IK L L+
AcrIIA34 M A D L A N W E H L E D I K K L A K E L A
MGV-GENOME-0233054_CDS_0007 2 AcrIIA5 0.80 View Alignment MGV-GENOME-0233054_CDS_0007 M C E Y C E --K -I I ----N -----N --------------K K ------I L ------D I -----(60)
M + +
AcrIIA5 M A Y G -K S R Y N S Y R K R S F N R S N K Q R R E Y A Q E M D R L E K A F E N L D G W Y L S S M K D S A Y -K D F G K
MGV-GENOME-0233054_CDS_0007 -----------------D N E -D K N -------Y I S K K K I E D T I -E -E L K G K -L -K D I S K R R (120)
+ +SK D I K I K
AcrIIA5 Y E I R L S N H S A D N K Y H D L E --N ---G R L I V N I K A S K L N F V D I I E -N -K L D K I -I E K I D K L D
MGV-GENOME-0233054_CDS_0007 E K S K T -K -E E -K T -V L W C L E I R T D E R I K T L Q E L L (154)
L KT E++
AcrIIA5 L D K Y R F -I -N A T -N -L E H D I K C Y Y K G F K T K K E V I
MGV-GENOME-0233054_CDS_0007 3 AcrIE6 0.80 View Alignment MGV-GENOME-0233054_CDS_0007 M C E Y C E -K ---I I N N -K K I L D I ----D N E -D K N Y I S K K K I E D T I E E L K G K L K D I S K R -R E (60)
M I ++D + + T + + L
AcrIE6 M N N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I -
MGV-GENOME-0233054_CDS_0007 K S K T K E E K T V L W C L E I -R T D ---E R I K T L Q -E L -L (95)
+L ++ L
AcrIE6 --------E I L E E Q Y P G -H A A D L ----S I -K N L C P
MGV-GENOME-0233054_CDS_0007 4 AcrIA3 0.79 View Alignment MGV-GENOME-0233054_CDS_0007 M -C E Y -C E ---K -I I N N ------K K -I ---L ----D I D N ---E D K N -----Y --------(60)
M + L +I Y
AcrIA3 M S F Y I M Y I K V K -E M S E Q K Q I S L R S -K Q K E L L Q R F F E I A E V D E N G D -L C I P L Y D S S G D L T L
MGV-GENOME-0233054_CDS_0007 I S K K K -I E D T I E -E L K G -K L K D I S K R R E -K S K -T K E E K T V L --W ---C L E I -R -T D -E R I (120)
+ L+ I + K V C +
AcrIA3 F K Q D S R -K Y Q M Y A Y -F R I -L R L I ----K K -Q I F F I K V K K V K R D K K F L C M H S N -V -I D -Q V
MGV-GENOME-0233054_CDS_0007 K T L Q E L L (127)
K++ E
AcrIA3 K S V L E -S
MGV-GENOME-0233054_CDS_0007 5 AcrIIA28 0.79 View Alignment MGV-GENOME-0233054_CDS_0007 M C E Y C E K I I N N K K I L D I D N E D K N -Y I S K K K I E D T I E E L K G K L K D I S K R R E K S K -------(60)
M + K ++ N IS K + + K
AcrIIA28 M K T I F ----T K K Q T E E L L N ----D -I S I E K Q K E L F N S M H D F R S Q H A K E A R I P G W S D K Y N K
MGV-GENOME-0233054_CDS_0007 -----T -K -E -E -K T V L -W C L E I R T -D -E R I K T L Q -E -L --L (102)
V +L+ L
AcrIIA28 L E K K M -L -S -D -F E E V -T G I K Y D T L E S E L I W D N L S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;