3D Structure for MGV-GENOME-0230910_CDS_0021 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.90 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0230910_CDS_0021 1 AcrIE6 0.72 View Alignment MGV-GENOME-0230910_CDS_0021 M -T I E E -E I -K Y W R K -T K R L Y -L E Q L E P K A L -H R I -K I D F G S S A M A K R K R W L K E K V A F C D (60)
M + E + K L E + ++ + +A + +A
AcrIE6 M N N D T E V -L E Q -Q I K A F E -L L A D E L K D -R L P T L -E I -L S P M Y T A V M V T Y D L I G K Q L A S R R
MGV-GENOME-0230910_CDS_0021 G Q -I E F L E G ----L -G -E Q E G -F --N -D (88)
IE LE
AcrIE6 A E L I E I L E E Q Y P G -H -A A D L S I K N L -C P
MGV-GENOME-0230910_CDS_0021 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0230910_CDS_0021 M -T I E -E E I -K -----------Y -W R ----K ----T -K R L Y L E Q L E P K A L H R I K I -D F G S (60)
M + +EQ
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L -P K N H R E P I K G -L F K S A V E Q F S S A R D F F K N -E N Y --
MGV-GENOME-0230910_CDS_0021 S A M A -K R K -R W L K E K V A F C D G Q I E F L E G -L G E Q E G F N D (98)
++ KE V + + E G +
AcrIIC4 --S K E L -A E K F N K E A V N E A V E K L Q K A I D L -A E K Q G I Q F
MGV-GENOME-0230910_CDS_0021 3 AcrIF23 0.60 View Alignment MGV-GENOME-0230910_CDS_0021 M -T I E E E I K Y W R K T K R L Y L E Q ---L E --------P ------------K A L -----H ----(60)
M + + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0230910_CDS_0021 -R I K I -----------D -F -G -S S A M -A K R K R -W L K -E K V A F C D ----G Q I E F L E G ---- (120)
+ E + + F
AcrIF23 G -R A L T G T A R Q K E W A E -K -I -R A -E K V -Q Q M N Q -D Q A E M A C D -P S G L L T A A K F W I E N R N D
MGV-GENOME-0230910_CDS_0021 -----------------L ----------------G E Q E G -F ---N --D (168)
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R -W G F
MGV-GENOME-0230910_CDS_0021 4 AcrIE1 0.60 View Alignment MGV-GENOME-0230910_CDS_0021 M --T ---I E E E I -K ----------Y ----W ----R -K -T -K -R -L Y L E ----Q -L -E -P -(60)
M + + +E
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L -S -L -I -V -F -Q A E T L S D -Q -A -N -E
MGV-GENOME-0230910_CDS_0021 K A L H R I K I D ---F G S S A M A K R K R W L K E K V A F C D G Q I E F L E G -L -G E Q E G -F -N -D (115)
A I+ + + K + G + D
AcrIE1 L A N -Y I R -R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R -V Y G D -A I D R D V D
MGV-GENOME-0230910_CDS_0021 5 AcrIF25 0.57 View Alignment MGV-GENOME-0230910_CDS_0021 M -T -I E ------------E E I -K -Y W R --------K --------T K R L Y L E Q --------(60)
M + E W + +
AcrIF25 M D N D D K K P D A L I H L R V P A E V -K -G R W -V K E S R L E G M K L T D W I T G R V E A K A L -S I A E V L E E
MGV-GENOME-0230910_CDS_0021 L ----E --------P --------------------------------------------K (120)
+
AcrIF25 A A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S -
MGV-GENOME-0230910_CDS_0021 -A L H ---R I K I -D F -G S -S A M -A -K R -K R W L K E K V A F C D G Q I E F L E G L -G -E Q -E G F -N - (180)
+ + + + R IE G
AcrIF25 G L P D S Y S G A V P N E G R T G W -V T A -S -Q M A R L F G ----G E A L W I E R C Q Q E L -G -G A -G K E D G
MGV-GENOME-0230910_CDS_0021 D (181)
AcrIF25 R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;