3D Structure for MGV-GENOME-0230107_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 84.28 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0230107_CDS_0001 1 AcrIIA12 0.80 View Alignment MGV-GENOME-0230107_CDS_0001 I R --F D --R P S C S P I A P R K -E --G A H --------T D R E L G E I I R F I N D T V R A G -I Y D P S V (60)
I K T + R V +Y
AcrIIA12 M S K T M Y K N -D V I E L I K N A K T N N E E -L L F T S V E R N T R E A A T Q Y F R C P E K H V S D A G V Y Y G E D
MGV-GENOME-0230107_CDS_0001 --E N D L T A I S S R L K H E R M F C S Q T L E (85)
+ L R L
AcrIIA12 F E F D G F E I F E D D L I Y T R S Y D K E E L N
MGV-GENOME-0230107_CDS_0001 2 AcrVIA1_Lwa 0.79 View Alignment MGV-GENOME-0230107_CDS_0001 I R F D R P S C S P I A P R K E G A ---H T D R E L G E I I R F I N D T V R A G ---I --Y -D P S -V E N D L T A (60)
+ + E I+ V + L
AcrVIA1_Lwa M E K I K L ---I C L R I N N D E L I T T D K D E W L K F I K R H R G K V S S I E Q F N W K I P G N -K L Q K A L E Y
MGV-GENOME-0230107_CDS_0001 I S S R L K H E R -M F C S Q T L E (78)
L + + +
AcrVIA1_Lwa S F D E L Y K F K Q K E N R R E T D
MGV-GENOME-0230107_CDS_0001 3 AcrIC3 0.79 View Alignment MGV-GENOME-0230107_CDS_0001 I R -F -D R P ---S ------C -S --------P --I ----A P ----R K ----E --G A --H -T D (60)
+ R
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S V V A S S G Q V K F M A D K T D R G L E S R F L V P E -A G N -R R I E V A
MGV-GENOME-0230107_CDS_0001 R E L G E I I -R F I -N -D T -V -R A G I Y D P -S -V -E -N D L T A I S S R L K H E R M F C S Q T -L E (116)
+ + + L ER +
AcrIC3 L T G R -D L E -A A N -A -L F -S -E L --A -A -S -V -E -A T N E M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0230107_CDS_0001 4 AcrIF1 0.79 View Alignment MGV-GENOME-0230107_CDS_0001 I R F D R P -S ---C S ---P -------------I A P -R -K -----E -G A -H -T D R E L G E I I R F (60)
+F + S + G + +
AcrIF1 M K F I K Y L S T A H L -N Y M N I A V Y E N G S K I K A R V E -N -V -V N G K S -V G -A -R D F D S T E Q L E S W
MGV-GENOME-0230107_CDS_0001 I N D T V R A G I Y D P S V E N D L T A I S S R L K -H E R M F C S Q T L -E (99)
+ L I + S
AcrIF1 F Y G ----L -----P G S G L G R I E N A M -N E ----I S R R E N P
MGV-GENOME-0230107_CDS_0001 5 AcrIF7 0.79 View Alignment MGV-GENOME-0230107_CDS_0001 I -R ----------F D R --P S C S P I A P -R K -E --G A --H T D R -E L G E -I I R F I N D T V R A -G (60)
+ + S + G +
AcrIF7 M S H A S H N G E A P K R I E A M T T F T S I V T -T N -P -D F G -G F E F Y V E A G Q Q F D D S A Y E E A Y G -V -
MGV-GENOME-0230107_CDS_0001 I Y D P S V E N D L T A I S S R L K H E -R M F C S Q T -L E (91)
V + +A LK + +
AcrIF7 S V P S A V V E E M N A K A A Q L K D G E W -L -N V S H E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;