3D Structure for MGV-GENOME-0224952_CDS_0025 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.08 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0224952_CDS_0025 1 AcrIIA14 0.70 View Alignment MGV-GENOME-0224952_CDS_0025 M K -I N T S Q V E M V L M N K A I P A H F L E K E I G I N R S A V T R I R N G E R K I G N L T L D T V I K I Q N W I D (60)
K + +E +L + + K G+ S + R+R+GER +G L LD++ ++ N
AcrIIA14 L K K -T ---I E K L L N -S D L N S N Y I A K K T G V E Q S T I Y R L R T G E R Q L G K L G L D S A E R L Y N Y Q K
MGV-GENOME-0224952_CDS_0025 E G N Y H -F S Y D Y N D L I K ---E -L E S ----D -I -A -E G L T E E -Y -----L -Y -I I -R G D Y L -(120)
E + K E T+ + D +
AcrIIA14 E I E N M K S V K Y I S N M S K Q E K -G -Y R V Y V N -V -V -N E -D T D K G F L F P S V -P K E V -I E N D K I D
MGV-GENOME-0224952_CDS_0025 E T ---L -D Y K P I -V D Y Y Y T -H E E I --E E G D L A E K V K T -Q D V L -S E -M -R -R Y N Q L K D G (178)
E KP + + ++ Q + + D
AcrIIA14 E L F N F -E H H K P Y V -Q K A K S R Y D K -N G I G Y K I V Q L D E G F Q K F I E L -N -K -E K M K E N L D Y
MGV-GENOME-0224952_CDS_0025 2 AcrIB5 0.70 View Alignment MGV-GENOME-0224952_CDS_0025 M K I N T S -Q V E M V L M N K A I P A H F L E K E I G I N R S A V T R I R N G E R K I G N L T L D T V I ----K -I (60)
M + L ++ + L G+ ++ + + + + +L++ +V
AcrIB5 M A G ---F -I K K Y L D S R G W T I Y Q L G N A T G L A H Q T I R S A D S -K T -V D Q L S A K N V R L I A E -V -
MGV-GENOME-0224952_CDS_0025 -Q -N W -I D E ---G -N Y H ----F S Y -D -Y -N -D L -I K -E -L ---E ----S -D -I A E G L T E E (120)
+ E + + L +
AcrIB5 F -H F -T A G E I L D E F Y E I E E E I T N D E -I -L -K E -L T -T -V F E K H G H N T D -E -I -S S E L L D G
MGV-GENOME-0224952_CDS_0025 Y L Y I -I R G D Y L E T L -D Y K P I V D Y Y Y T H E E I E E G D L A E K V K T Q D V L S E M R R ---Y N Q L K D G (180)
+ ++D E L +
AcrIB5 E T I K L D M --T -D --D N I T K L A D A V N A T E H F T -A Y L D S S ----T ------D Y M I -V E A T -Q
MGV-GENOME-0224952_CDS_0025 3 AcrIIC7 0.66 View Alignment MGV-GENOME-0224952_CDS_0025 M K I -N -T S -Q --------------------------------------------------(60)
M +
AcrIIC7 M N V I E A E -K -F L K P K T N T T T F K F L V D E K L T A N L T G M K P I G R I D T Q R F L E S H R A S E F K I L L
MGV-GENOME-0224952_CDS_0025 --V -E M V L M N K A I P A H F L E K E I G I N R S A V T R I R N G E R K I G N L T L D T V I K I Q N W I D E G N Y H (120)
+L + L KE+G++ S V+++ + R IG+ + ++KI
AcrIIC7 D N P L K E L L N Y Y G L T Q Y Y L Q K E V G L S Q S T V S K L I S D N R P I G S F Q F A V L L K I A E A T ------
MGV-GENOME-0224952_CDS_0025 F S Y D Y N D L I K E L E S D I A E G L T E E Y L Y I I R G D Y L E T L D Y K P I V D Y Y Y T H E E I E E G D L A E K V (180)
AcrIIC7 ------------------------------------------------N ----R ------
MGV-GENOME-0224952_CDS_0025 K T Q D V L S E M R R Y N Q L K D G (198)
+V+ + N L+D
AcrIIC7 S V G E V A D Q L K E F N D L R D A
MGV-GENOME-0224952_CDS_0025 4 AcrIIA1 0.66 View Alignment MGV-GENOME-0224952_CDS_0025 M K I N T S Q V E M V L M N K A I P A H F L E K E I G I N R S A V T R I R N G E R K I G N L T L ---D -----T -V (60)
M ++ L + + L K GI+ + + + + T+
AcrIIA1 M T -I -K L L D E F L K K H D L T R Y Q L S K L T G I S Q N T L K D Q N E --K P L N K Y T V S I L R S L S L I -S -
MGV-GENOME-0224952_CDS_0025 I K I Q -N -W -I -D -E -G -N Y H --F S Y D Y N D L I K E L E S D I A E G --L -T E E Y L Y I I R G D Y L E -(120)
S D + L+ + + E +I+ +
AcrIIA1 G L S V S -D -V -L -F -E -L E D I E K N S D D L A G F K H L L D K Y K L S -F P A Q E F E L Y C L I K -E F E S A
MGV-GENOME-0224952_CDS_0025 T L D Y K P I V D Y Y Y T -H E E -I E E -G D L A E K ----------V K T Q -D V L S E M R R Y N Q L K D G (178)
+ E + +++ + +
AcrIIA1 --N I E V -L P F ---T F N R F -E N E E -H ---V N I K K D V C K A L --E N -A I T V L K E K K N E L -L
MGV-GENOME-0224952_CDS_0025 5 AcrVIA6 0.65 View Alignment MGV-GENOME-0224952_CDS_0025 M K I -N -----T S Q -----V E M V L M N K A I P A H F L E K E I G I N R S A V T R I R N G E R K I G N L T -L (60)
M L ++ G++ + + + +G +
AcrVIA6 M A D K V K S I Q P G P -I F Y D V F L V Y L R V I G T N L K D W C A P H G V T A T N A K S A A T G G W -----N G -
MGV-GENOME-0224952_CDS_0025 D T V I K I Q N W I -D E G N Y H F S Y D Y N D L I K E L E S D I A E G L T E E Y L Y I I R G D Y L E T L D Y K P I V D (120)
+ + + D +
AcrVIA6 T K A R A L R Q K M I D -E -----------------------------------V ----------
MGV-GENOME-0224952_CDS_0025 Y Y Y T H E E I E E G D L A E K V K T Q D V L S E M R R Y N -Q -L K D G (157)
L
AcrVIA6 -----------------G E E T F L R L Y T E R L R -R -E A A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;