3D Structure for MGV-GENOME-0222615_CDS_0062 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.89 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0222615_CDS_0062 1 AcrIE6 0.72 View Alignment MGV-GENOME-0222615_CDS_0062 M I K T R I E E L D S L I E M -Y -T -I -E -I -E -D D -T E -C L K K Y K D E L E N V L K E S D C L S E V D N S R (60)
M + E L++ + S +
AcrIE6 M -N N D T E V L E Q ----Q -I -K -A -F -E -L -L A D -E L K D R L P T L ----E I L S -P M Y T A V M V T
MGV-GENOME-0222615_CDS_0062 I C S L H K I V E R -K ---A N Q I V L -K -K ----E --L N R L -F W (99)
+ K + + + + +
AcrIE6 Y D L I G K Q L A S R R A E L I E I L E E Q -Y -P G H A A D L S I K N L C P
MGV-GENOME-0222615_CDS_0062 2 AcrIE1 0.64 View Alignment MGV-GENOME-0222615_CDS_0062 M I ---K T R I E E L D --------------S -L -I E -M -Y T -I E I E D D T E -C L K K Y K D E L E N -(60)
M L + + + E L EL N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E -E -A A -S -I L -S L I V F -Q A E T -L S D Q A N E L A N Y
MGV-GENOME-0222615_CDS_0062 V L K E -----S D C L S E V D N S R I C S L H K I V E R K A N -Q -I V L K -K E L N R L F W (109)
+ + + + + + I + + R
AcrIE1 I R R -Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H -G I R V Y G D A I D R D V D
MGV-GENOME-0222615_CDS_0062 3 AcrIIC4 0.59 View Alignment MGV-GENOME-0222615_CDS_0062 M I -K -T R I E E L D -----S ----L I E M Y T I E I E D D T E C L K K Y K D E L E N V L K E S D C L S E V D -(60)
M + + L I + + K E+
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
MGV-GENOME-0222615_CDS_0062 N -S R I C S L H K I V E R K A N Q I V L K K E L N R L F W (90)
+ +VE+ I L +
AcrIIC4 -K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q -F
MGV-GENOME-0222615_CDS_0062 4 AcrIF23 0.56 View Alignment MGV-GENOME-0222615_CDS_0062 M -I -K T R I E E L D S L I E --------------------------------------------(60)
M T ++ +D +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0222615_CDS_0062 ---------------M ----Y -T -I E I -----E D D T E C L K K Y K D E L E N V L K E ----S D C L (120)
+ + + +
AcrIF23 G R A L T G T A R Q K E W A E K I R A E -K -V Q Q -M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0222615_CDS_0062 S E -V -D -N -S R I C -S L H -K I ----V E -R -K A N -Q -I -V L K K E L N R L ---F -W (172)
L A + E N L + +
AcrIF23 A -G -F -V -M -Q Q K A L L -A Q -H R S A K A A -G Q A D K -V -A K I A A E Y N A L T A R W G F
MGV-GENOME-0222615_CDS_0062 5 AcrIC3 0.56 View Alignment MGV-GENOME-0222615_CDS_0062 M I K T R I E E L D ------S ----L I E -M Y T ------I E I E -D D T E --C L -K K Y K D E L E N --V (60)
M + ++ + + +E
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V -A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T
MGV-GENOME-0222615_CDS_0062 L K E -S D C L S E V D N S R I C S L H K I V E R K A N Q I V L K K E L N R L -F W (102)
+ + ++ + + + S+ E + + +N++
AcrIC3 G R -D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;