3D Structure for MGV-GENOME-0222032_CDS_0016 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.31 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0222032_CDS_0016 1 AcrIIA7 0.71 View Alignment MGV-GENOME-0222032_CDS_0016 M T F K E A L E K M K Q G Y T V K R P H W A G F W H L D T E N E V L N M H T K E G K V I E I R E T D R L L Y T L E N I A (60)
MTF ALE K
AcrIIA7 M T F G Q A L E S L K R ------------------------------------------------
MGV-GENOME-0222032_CDS_0016 A D D W I V A T N V N T P I A G G T A L F D F G E A I K L V K R G L K L S R K G W N G K G Q Y I S I A V -G I S Y I D L (120)
+ RKGWNG
AcrIIA7 -G -------------------------------H L V A R K G W N G -------K -G -M F I F M R
MGV-GENOME-0222032_CDS_0016 D -D T V ---------R N -----------S E H -K D -----M G S R A I V F N G T S G T Q -V G W L A S (180)
D++ + + H + + GT GWLAS
AcrIIA7 P E D S L P T N M I V N Q V K -S L P E S F K R W V A N N H G D S E T D R I K F T A Y L C M K A A D G T I V N G W L A S
MGV-GENOME-0222032_CDS_0016 Q A D M L A E D W Y V I D (193)
Q DMLA DW +++
AcrIIA7 Q T D M L A N D W V I V E
MGV-GENOME-0222032_CDS_0016 2 AcrIIA4 0.55 View Alignment MGV-GENOME-0222032_CDS_0016 M T F K E A L E K M K Q -G Y T V K R P H W A G F W H L D -T E N E V L N M H T K E G K V I E I R E T D R L L Y T L E N (60)
M+ +++ K+ YTVK + ++ + +G I E +E
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T -D --S -N S -I T Q L I I R V N N D G N E Y V I S E -S E N E S I V E K
MGV-GENOME-0222032_CDS_0016 I ---A A D D W I V A -T N -V N T P I A G G T A -L F D F G E A I K -L V K R G L K L S R K G W N G K G Q Y I S I A (120)
W +
AcrIIA4 F I S A F K N G W N Q E Y E -D E E E F Y N D M Q -T -I T L K S ---E -----------------------
MGV-GENOME-0222032_CDS_0016 V G I S Y I D L D D T V R N S E H K D M G S R A I V F N G T S G T Q V G W L A S Q A D M L A E D W Y V I D (173)
+
AcrIIA4 ---------------------------------------------------L N
MGV-GENOME-0222032_CDS_0016 3 AcrIIA24 0.51 View Alignment MGV-GENOME-0222032_CDS_0016 M -T F K E A L E K M K Q -G Y T V -K R P H W A G F W H L D T E N E V L N M H --T -K -E G K V I E I R -E T ---(60)
M +L K+ + N + G+ + +
AcrIIA24 M K K A Q Q L L K E I K T N N V S Y A I M D E D N E I Y C N K E T N N I M D I Y G Y D N -E N G H F Y G V Y G D V V D G
MGV-GENOME-0222032_CDS_0016 --D R L L Y T L E N I A A D D ---W I -V A T N V N T P I A G G T A L F D F G E A I K L V K R G L K -L S R K G W N (120)
D + + I+ + PI T L + KR
AcrIIA24 Q I D S R Y F S D D A I L N A I D K L L -F -L --G D -P I K -R T D L P S D A D ---F -K R T F -F -F --E --
MGV-GENOME-0222032_CDS_0016 G K G Q Y I S I A V G I S Y I D L D D T V R N S E H K D M G S R A I V F N G T S G T Q V G W L A S Q A D M L A E D W Y V (180)
AcrIIA24 ------------------------------------------------------------
MGV-GENOME-0222032_CDS_0016 I D (182)
+
AcrIIA24 -E
MGV-GENOME-0222032_CDS_0016 4 AcrIF18 0.51 View Alignment MGV-GENOME-0222032_CDS_0016 M T F K E A L E K M K Q G Y T -V K R P H W A G F W H L D T E N E V L N M H T K E G K V I E I R E T D R L L Y T L E N I (60)
MT K Y +
AcrIF18 M T T I ------K A A Y -I S -K -----D -----------------------------------
MGV-GENOME-0222032_CDS_0016 A A D D W I V A T N V N T P I A G G T A L F D F G E A I K L V K R -G L K L S R K G W N G K G Q Y I S I A V G I -S -Y (120)
++
AcrIF18 -----------Q N -------------W ----N D G -------------------T -T T -Y W
MGV-GENOME-0222032_CDS_0016 I D L D D T V R N S E H K D M G S -R A I V -F N G T S G T Q V G W L A S -Q A D M L A E D W Y V I -D (172)
D+ H S + G Q + I +
AcrIF18 F D V N G E T F G V V H G -G E S W N -A K V -V D C D G A P S D Q Y T V D Q F N I --T E D -M I A E
MGV-GENOME-0222032_CDS_0016 5 AcrIIA12 0.50 View Alignment MGV-GENOME-0222032_CDS_0016 M T -F ---K -E A L ---E K M K -Q -G Y T V K R -P H W A G F W H -L D T --E N E V L N M H T K E G K V I E -(60)
M+ +++ K + + + K
AcrIIA12 M S K T M Y K -N D V I E L I K N A K T -N N E E L L F T S ----V -E R ---N T R E A A T Q Y F R C P E K ---H
MGV-GENOME-0222032_CDS_0016 I -R E T D R L L Y T L E N I A A D D W I V A T N V N T P I A G G T A -L F D F G E A I -K L V K R G L K L S R K G W N (120)
+ E D + + I
AcrIIA12 -V -S D A G V Y -Y G E D F E F D G F E I F E D D L --I -Y T R -S -Y ----D K E -E -------------
MGV-GENOME-0222032_CDS_0016 G K G Q Y I S I A V G I S Y I D L D D T V R N S E H K D M G S R A I V F N G T S G T Q V G W L A S Q A D M L A E D W Y V (180)
AcrIIA12 ----------------------------------------------------L -------
MGV-GENOME-0222032_CDS_0016 I D (182)
AcrIIA12 -N
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;