3D Structure for MGV-GENOME-0218036_CDS_0020 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.96 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0218036_CDS_0020 1 AcrIE1 0.71 View Alignment MGV-GENOME-0218036_CDS_0020 M T S D D R L R E Y V E K D E I Y -Q -K -F -I N G I L K A N D M S D F D K F C V Q H C L D I Q E V L E E N Q E L N K (60)
M +L + V + +
AcrIE1 M -E -K K L S D ---A ----Q -V -A -L -----------------V ---A A W R K Y P D L R E ----
MGV-GENOME-0218036_CDS_0020 Q L E G V -R -E -E -R D Y L F N K L S -V R N K Y -L -A -E -E -N -K V L -D D K I R Y Y I D Q K N E W V E L L (120)
+ + + + + Y Q E +
AcrIE1 ---S -L -E -E -A -A S I L S L I V F -----Q -A -E -T -L -S D Q -A N E L A N Y I R R Q G L ---E E A
MGV-GENOME-0218036_CDS_0020 G K F K T Q Q K D F I M W L H S Y I E K L T T T G C Y N N D D D E -I -L I L -K -I V L K R Y K E I -V -N -G D D K (180)
+ +++ + + D
AcrIE1 E G A C R N I D I M R A K W V E V C G E V N Q --------H G I -R -V Y G -D --------A I -D -R -D V D
MGV-GENOME-0218036_CDS_0020 2 AcrIIA19 0.61 View Alignment MGV-GENOME-0218036_CDS_0020 M T S D D R L R E Y V E K D E I Y Q K F I N G I L K A N D M S D F D K F C V Q H C L D I Q -E V L E E N Q E L N K Q L E (60)
M + E +E K + K++ +
AcrIIA19 M K L ---I V ---E V E E T N Y K N L V N Y T K L T -N E S H N I L V N R L I S E Y I T -------K ------
MGV-GENOME-0218036_CDS_0020 G V R E E R D -Y -L -F N -K L -S V R N K -Y L A E E N K V L D -D K I R Y Y I -D Q K N -E W V E L L G K F -K T (120)
L + L+E L + + +
AcrIIA19 -P ----Y E -L -R -L D -L S E R Y S N R D L I E F K F M L I E -Y C K E A L Q -D I K E -L A N S D E A -Y -E
MGV-GENOME-0218036_CDS_0020 Q Q K D F I M W L H S Y I E K L T T T G C Y N N D D D E I -L -I L -K I V L K R Y K E I V N G D D K (171)
+ F ++ E + + N + + + Y + K
AcrIIA19 T D E A F E A V F R Q L F E E V I S -----N ---P -D -T V -L -K A F H S Y T S F L E E N -K
MGV-GENOME-0218036_CDS_0020 3 AcrIIA11 0.57 View Alignment MGV-GENOME-0218036_CDS_0020 M T S --D D R L R E Y V E K D E I Y Q K F I N G I L K -A N D M -S D F D K F C V -Q H -C -L -D I Q E V L E E N Q (60)
M E K + K + +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K ---D R -E T Q I E -A -G W Y ----D W -F -C -D ----D K A L A G
MGV-GENOME-0218036_CDS_0020 E L N K Q L E G V R E E R -D Y L F N K L S V R N K -Y L A E E N K V L D D K I -R ---Y -Y I D -Q K N E W -V --(120)
L K ++ DY+ V K L D + Q+ E
AcrIIA11 R L A K I W G I L K G I T S D Y I L D N Y R V W F K N N -C P M V G P L Y D D -V -R F E P L -D E E Q R D E L Y F G V
MGV-GENOME-0218036_CDS_0020 E -L L -G K F K T Q ----Q ----------------K D F I M W L H S Y I E K L T T T G C -Y N N ---D -(180)
+ K + ++ ++ + L + Y
AcrIIA11 -A I -D D K R R E K K Y V I -F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N E -E F Y K A R E K K R
MGV-GENOME-0218036_CDS_0020 ---D D E I L I L K I V L K R Y K E I V N G D D -K (207)
++ + R EI+
AcrIIA11 Q E M E E A N N K F A E I M Q R A D E I L W N L K E D
MGV-GENOME-0218036_CDS_0020 4 AcrIC3 0.57 View Alignment MGV-GENOME-0218036_CDS_0020 M T S D D R L R E Y V E K D E I Y Q K ---F I N G I L K A N D M S D F D K F C V Q H C L D -I Q E V L E E N Q E L N K (60)
M S + + V+ + +
AcrIC3 M -S I -Q V T S T ---N G ---R T V N L E ----------I ------E ----L -G S V V A S S G Q V K -
MGV-GENOME-0218036_CDS_0020 -Q L E G V R E -E R D Y L F -N K L S V R N K Y L -A E E N K V L D D K I R Y Y I D Q K ---N -E -W -V E L L G K (120)
++ L L V L G+
AcrIC3 F M A D ----K T D R G L E S R F L V -P ----E -A ----------------G N R -R -I -E V A L T G R
MGV-GENOME-0218036_CDS_0020 F K T Q Q K D F I M W L H S Y I -E K L T T T G C Y N N D D D E I L I L K I V L -K R Y K E I V N G D D K (173)
L + + L + ++ +
AcrIC3 D L E A A N A L F S E L A A S V E -A T N E ---------M Y R E L D A E R A -Q I N K A L ---E G
MGV-GENOME-0218036_CDS_0020 5 AcrIE6 0.57 View Alignment MGV-GENOME-0218036_CDS_0020 M T S D D R L R E Y V E -K -D E I Y Q K F I N G I L K A N D M S D F D K F C V Q H C L D I Q E V L E E N Q E L N K Q L (60)
M+ E E +
AcrIE6 M N --N D -T ---E V -L -E ----------------Q ---Q ---------------------I
MGV-GENOME-0218036_CDS_0020 E G V R E -E -R -D -Y -L -F -N K L S V R N K Y L A E -E N K V L D D K I R -Y Y I -D -Q K N E W V E L L G K F (120)
L R L E L Y +
AcrIE6 K ----A -F -E -L -L -A -D -E L K D R L P T L -E I ----L ---S -P M Y -T -A V M V T Y D L I G K Q L
MGV-GENOME-0218036_CDS_0020 K T Q Q K D F I M W L H S Y I E K -L -T T T G C Y N -N D D D E I L I L K I V L K R Y K E I V N G D D K (173)
+ + I L L
AcrIE6 A S R R A E L I E I L E E Q Y P G H -A -------A -----D L --------S I --K -N L C P
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;