3D Structure for MGV-GENOME-0217557_CDS_0045 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.83 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0217557_CDS_0045 1 AcrIF11 0.90 View Alignment MGV-GENOME-0217557_CDS_0045 M E M E L F H G S H S E I S S I S D T G L F G G I F A A A S R E A A A S H G D Q I Y R I Q S P R P L S N Y A L N Y E I D (60)
M MELFHGS EIS I D+G+FGG+F A +E A+SHG+++ RI SP PL+ YALNYEI+
AcrIF11 M S M E L F H G S Y E E I S E I R D S G V F G G L F G A H E K E T A L S H G E T L H R I I S P L P L T D Y A L N Y E I E
MGV-GENOME-0217557_CDS_0045 N A W E V A I E V A G G D E D V A E A I M T P E C S A L V D A D D A G E Q G W E F Q R L R G V L A R T L G F T S V E M L (120)
+AWEVA++VAGGDE VAEAIM + + D GWE QRLRGVLA LG TSVEM
AcrIF11 S A W E V A L D V A G G D E N V A E A I M A K ----A C E S -D -S N D G W E L Q R L R G V L A V R L G Y T S V E M E
MGV-GENOME-0217557_CDS_0045 D E H G T T Y L C F S G C T I E R I A (139)
DEHGTT LC GCT+E+ +
AcrIF11 D E H G T T W L C L P G C T V E K -I
MGV-GENOME-0217557_CDS_0045 2 AcrIB8 0.56 View Alignment MGV-GENOME-0217557_CDS_0045 M E M E L F H G -S H S E I S S I S D T G L --------F G G -I F A -A A -S -R E A A A S H -G D Q I Y R I Q S (60)
M + + +I+ GL + ++
AcrIB8 M -K T I D R D E I A K D I N A C I -K G L G R D I R T N W E L -G F E -E G -Q -I -I ---T -L E -R Y E S W T T
MGV-GENOME-0217557_CDS_0045 P R P L S N Y A L N Y E I D N A W E V A I E V A G G D E D V A E A I M T P E C S A L V D A D D A G E Q G W E F Q R L R G (120)
+ +
AcrIB8 G G D F --T V ------------------------------------C -----N -D -------
MGV-GENOME-0217557_CDS_0045 V L A R T L G F T S V E M -L D -------------E ------------H G T T Y L C F S G ---C ----(180)
+ L G
AcrIB8 -------C P V E Y H F E I E N E V P C H V V D Y N N K E E V I A L G A E D C E D E N E V L L P A G T K L E V V Y G
MGV-GENOME-0217557_CDS_0045 -----------T ------I -E R I A (204)
E
AcrIB8 E H E D D N E E M G F Y T V I F K Y -L E E E K
MGV-GENOME-0217557_CDS_0045 3 AcrIC1 0.43 View Alignment MGV-GENOME-0217557_CDS_0045 M E M E L F H G S H S E I S S I S D T G L -F G G I F A A A -S R E A A A S H ---------------------(60)
M + + G+FA + ++ S
AcrIC1 M N -N ---L -K K T A -I T -----H -D G V F A Y K N T E T V I G S V G R N D I V M A I D A T H G E F N D K N F
MGV-GENOME-0217557_CDS_0045 ------------------------------------------------------------ (120)
AcrIC1 I I Y A D T N G N P I Y L G Y A Y L D D N N D A H I D L A V G A C N E D D D F D E K E I H E M I A E Q M E L A K R Y Q E
MGV-GENOME-0217557_CDS_0045 ----G -D Q I Y R I Q -S P -R -P L S N Y A L N Y E I D N A W E V A I E V A G G D E D V A E A I M -T P E C S A L (180)
+ R+ + + + A
AcrIC1 L G D T V H G T -T R L A F D D D -G Y M T V R L D Q -Q ---A Y P D --------------Y R P -------
MGV-GENOME-0217557_CDS_0045 V D A D D -A G E Q G W E F Q R L R G -V L A R T L G F T -S V E -M -L -D E --H --G T T Y L C F S G C T I E R I (240)
+++ G V ++ ++
AcrIC1 --E N -D ---D --K -H I M W R A L A L T A T G K E L E V F W -L -V E D Y E D E E V N S W D F D I A D D W R E -
MGV-GENOME-0217557_CDS_0045 A (241)
+
AcrIC1 L
MGV-GENOME-0217557_CDS_0045 4 AcrIIA26 0.43 View Alignment MGV-GENOME-0217557_CDS_0045 M E M E L F H G S H S E -I S S I S D T G L --F G G I F A A A S R E A A A S -H -------------------(60)
M L + + ++ + + + S
AcrIIA26 M K -K L Y I Q T N Q F A N G E L Q V ---E N -T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q
MGV-GENOME-0217557_CDS_0045 --------------------------------G D Q I Y -R -I Q S P R P L S -N -Y A L N Y E I D N (120)
+ +
AcrIIA26 N Y K D E Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E -Q -L E I T Y T -E -F -D P ---E E E
MGV-GENOME-0217557_CDS_0045 A W E V A I E V A G G D E D V A E A I M T P E C S A L V D A D -D A G E Q G W E F Q R L R G V L A R T L G F T -S V E M (180)
++ + E ++ + +
AcrIIA26 ----L A K C I A N K -----------N -------R -K S E F Y G N G L K V I A E Y L E S ----I --S -
MGV-GENOME-0217557_CDS_0045 L -D -------------------------E --H --G T T Y L C F -S G C T I E R -I A (232)
G E +
AcrIIA26 H E -D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F E --H -V E R S E -T -I
MGV-GENOME-0217557_CDS_0045 5 AcrIIA33 0.42 View Alignment MGV-GENOME-0217557_CDS_0045 M E M E L F H G S H S E I S S I S D T G L F G G I F A A A S R E A A A S H G D Q I Y -R -I Q -S P R P L S N Y A -L N (60)
M + +S G I + E + + Y+
AcrIIA33 M -I K -W T -G K S T D -----K ---G W I R T -V E A E ----T Y Y K L L E -T -L V D K G Y I G D Y I D S -
MGV-GENOME-0217557_CDS_0045 Y E I D N A W E V A I E V A G G D E D V A E A I -M -T P -E C S A -L V D A ---D D A ---G -E Q G -W -E F Q R (120)
+ E+A A D + A +++R
AcrIIA33 -----D S Q L F H E L A Y V S ----P A -V -A -D L -E D R L -N D E H Q V E Q A L E D -L --E N -F D W N R
MGV-GENOME-0217557_CDS_0045 L R G V L A R T -L -G F -T S V E M L D -E H G T T Y L C F S G C T I E R I A (160)
+ L F T + ++ + E I
AcrIIA33 V F E K L T D -Q -Q -F Q T -A I A --G -C T S Q A Y -Y Q --E F E V I E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;