3D Structure for MGV-GENOME-0217296_CDS_0025 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.18 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0217296_CDS_0025 1 AcrIE1 0.71 View Alignment MGV-GENOME-0217296_CDS_0025 M E E L Q K L E E L I S L L Y Q D K L T Q Y G K R L L V E N I E K L Q K E N E E -L R -A K W D K D T H I L Q N K L D Y (60)
ME KL ++ +L V K + R + IL+ +
AcrIE1 M E K --K L S D A Q V A L -------------V A A W R K Y ----P D L -R E -S L E E A A S I L S L I V F -
MGV-GENOME-0217296_CDS_0025 A N A D R I D L T Q Q N K E L -R K E N E E L K N K I -N Q L E -N M -N -E F Q -S K D I E -K A V D Y T F E L N K E (120)
+L I ++ + +
AcrIE1 --------------Q A -----------E -T L S D -Q A -N -E L A -N Y I R R Q G L E E A E G A C R N
MGV-GENOME-0217296_CDS_0025 I E I K D Q I I D L M S E M L N N H D I D E D I C K Q M G -Q K E N C N E F T D K E N C K N C I K Q -Y F E N K L K K (179)
I+I +N+ G + + + +
AcrIE1 I D I M R A K W V E V C G E V N Q ---------H -G I -R V Y G -D -------------A -I D R D V -D
MGV-GENOME-0217296_CDS_0025 2 AcrIIA19 0.59 View Alignment MGV-GENOME-0217296_CDS_0025 M E E L Q K L E E L I S L -L Y Q D K L T Q Y G K R L L V E N I E K L Q K E -N -E -E L -R -A -K -W -D -K D T H (60)
M + E K
AcrIIA19 M K L ---I V E ----V -E ------------E T ----N Y K N L -V -N -Y T -K -L -T -N -E -S H N
MGV-GENOME-0217296_CDS_0025 -I L Q N K L D Y A N A D R I D L T Q Q N K E L R K E N E -E -L -K N K I N -Q L -E -N M N E F Q S K D I E K A V D (120)
+++ + L E
AcrIIA19 I L V N R L I S E Y I T -------K ---P ----Y E -L -R ----L D -L S E R -----------Y S N R
MGV-GENOME-0217296_CDS_0025 Y T F E L -N -K E -I E I K D Q I I D L M S E M L N N H D I D --E D I C K Q M G Q K E N C N E F T -D K E N C K N C (180)
E IE ++ E +N+ ++ +++ + E ++
AcrIIA19 D L I E F K -F -M L I E Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V F -R Q L F E E V I S N P D T V L K A
MGV-GENOME-0217296_CDS_0025 I K Q Y F E N K L K -K (192)
++Y K
AcrIIA19 F H S Y T S F L E E N K
MGV-GENOME-0217296_CDS_0025 3 AcrIC3 0.58 View Alignment MGV-GENOME-0217296_CDS_0025 M E E L Q K ---L E E L I S L L -Y Q D K L -T Q Y -G K R L L V E N I E K L Q K E N E E L R A K W D K D T -H I L Q (60)
M +Q ++L + + + ++ +
AcrIC3 M -S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K ---T ---D R G ----L E S R -F ----
MGV-GENOME-0217296_CDS_0025 N K L D Y A N A D R I --D L T Q ---Q N K E L R K E N E E L K N K I N Q L E N M N E F Q S K D I E K A V D Y T -F E (120)
+ +
AcrIC3 -----------L V ----P E A -----------------------------G N R R I -E V A -L
MGV-GENOME-0217296_CDS_0025 L N K E I E I -K -D -Q -I -I -D -L -M -S -E M -L N N H D I D E D I C K Q M G Q K E N C -N E F T D K -E -N (180)
+ + ++ + +
AcrIC3 T G ---R -D -L -E -A -A -N -A -L -F -S -E L A A S V E A T N E ---------M Y R ----E L D -A -
MGV-GENOME-0217296_CDS_0025 C K N C I K Q Y F E N K L K K (195)
Q L
AcrIC3 ---E R A Q I -N K A L E G
MGV-GENOME-0217296_CDS_0025 4 AcrIE6 0.58 View Alignment MGV-GENOME-0217296_CDS_0025 M E E L Q K -L E E -L I -S L L Y Q D K L T Q Y G K R L L V E N I E K L Q K E N E E L R -A -K -W -D K D T H I L Q (60)
M + E + ++
AcrIE6 M N --N -D -T E V -L E ----------Q ---Q -----------I ----K -A -F -E ----L L A D
MGV-GENOME-0217296_CDS_0025 N K L D Y A N A D R I D L T Q -Q -N K E L R K E N E E L K N K I N Q L E N M N E F Q S K D I E K A V D Y T F E L N K E (120)
D + S + + K
AcrIE6 E L K D R L ----P ----T -L -----------E I -------L ----S P M Y T A V M V T Y D L I G K Q
MGV-GENOME-0217296_CDS_0025 I -E I K -D Q -I I D L M S E M L N N H D I D E D I C K Q M G Q K E N C N E F T D K E N C K N C I K Q Y F E N K L K K (180)
+ + +I++ E H + L
AcrIE6 L A -S R R -A E L I E I L E E Q Y P G H -A --A -------D L -----------------S -I K N L C P
MGV-GENOME-0217296_CDS_0025 5 AcrIIA11 0.56 View Alignment MGV-GENOME-0217296_CDS_0025 M E E L Q K L E E L I S L L Y Q D K L T Q Y G K R L L --V E N I E K L Q K -E N E E L R A K W D -K -D -T H I L Q N (60)
M L + + + +A +
AcrIIA11 M A -D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C -D ----D K A L -A G -R -L -A K I W G
MGV-GENOME-0217296_CDS_0025 -K L D -Y A N A D -R -I D L T -Q Q N K E L R K -E N E E L K N K I N Q L E N M N E F Q -S -K -D I E -K A V D Y (120)
L + + + K + +
AcrIIA11 I -L K G ----I T S D -Y I L D -N Y R V W F K N N C P M V G P L Y D -D V R F E P L -D -E -E Q -R D E -L Y F
MGV-GENOME-0217296_CDS_0025 T -F E L N K E ----I -E I -K D -----------Q I I D L M S E M L N N H D ---I D E D I C -K Q M -G Q (180)
+ + + +N + + K
AcrIIA11 G V -A I D D K R R E K K Y V -I F T A R N D Y E N E C G F N N V R E V R Q F I N G W E D E L K N -E E F Y K A -R E -
MGV-GENOME-0217296_CDS_0025 -----K E -N -C N E F T D K E N C K -N C I K Q -Y F E N K L K K (216)
E N F + N
AcrIIA11 K K R Q E M E E -A N N K F ---A E I M Q -R A D -E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;