3D Structure for MGV-GENOME-0214387_CDS_0050 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 91.76 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0214387_CDS_0050 1 AcrIE6 0.83 View Alignment MGV-GENOME-0214387_CDS_0050 M R K L I L S G D D W F E L K H T L E -L -F A I V T N N A A N E Y E N M A A -H E -R A A E L S E K H A N L A K R N R (60)
M L + + +A E + +
AcrIE6 M -N -N -D ---T E V L E ----Q -Q -I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G
MGV-GENOME-0214387_CDS_0050 E R A E Y Y K R L M A L V E -S ---A E -R L P E -T K E D A E (93)
+ + + + K
AcrIE6 K Q L A S R R A E L I E I L E E Q Y P G H A A D L -S I K N L C P
MGV-GENOME-0214387_CDS_0050 2 AcrIF2-IC2 0.83 View Alignment MGV-GENOME-0214387_CDS_0050 M -R K -L I L ---S G D D W F E L K H T L E -L F A I V T N ------N A A N -E Y E N M A A --H E R --A A E (60)
M K + + D + + + AI+ Y
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A -E A I A I A K -D Q V W D G E G -Y T K Y T F D -D N S V L I Q S G -T
MGV-GENOME-0214387_CDS_0050 L S E K H A N L A -K -R N -R -E -R A -E -Y -Y K -R L -M A L V E S A E R L -------P E T K E D A E (117)
+ + + S E+ E+ E
AcrIF2-IC2 T Q ---Y A M D A -D -D A -D -S -I K -G -Y -A D W -L D D E A R S -A E -A S E I E R L L E S V E E -E
MGV-GENOME-0214387_CDS_0050 3 AcrIF2 0.83 View Alignment MGV-GENOME-0214387_CDS_0050 M -R -K L I L S G D D -W F E L K H T L E ---L F A I -V T N ---N A A N -E Y E N M A A -----H -E -R A A (60)
M + +E + V Y
AcrIF2 M I A Q Q H K -D ---T -V A A C E A A E A I A I A K D Q V --W D G E G Y -T K Y T F D D N S V L I Q -S -G ---
MGV-GENOME-0214387_CDS_0050 E -L -S -E -K H A N L A -K -R N -R -E -R A -E -Y -Y K -R L M A L V E S A E R L ----P E T K E -D --A (120)
+ L + S E
AcrIF2 T T -Q -Y -A ----M D A -D -D A -D -S -I K -G -Y -A D W L D D E A R S -A E -A S E I E R L L E S V E E -
MGV-GENOME-0214387_CDS_0050 E (121)
E
AcrIF2 E
MGV-GENOME-0214387_CDS_0050 4 AcrIC3 0.83 View Alignment MGV-GENOME-0214387_CDS_0050 M R K L I L -S G -------D D W F E L K H T L E ---L F A I V T N ----------N A A N E -Y E -N M -A (60)
M + + + + + A T A N
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I -E V A L -
MGV-GENOME-0214387_CDS_0050 A -H -E R A A E L S E K H A N L A K R N R E R A E Y Y K R L M A L V E S A E R L P E T K E D -A E (110)
E L +E ++
AcrIC3 -T -G ----R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R --A Q I N K A L E G
MGV-GENOME-0214387_CDS_0050 5 AcrIE1 0.82 View Alignment MGV-GENOME-0214387_CDS_0050 M R -K L ---I -L -S G -----------D D W F E L K H T L E L F A I V T N N A A N E Y E N M A A H E R A A E (60)
M KL + E+ L L + ++ A R
AcrIE1 M E K K L S D A Q V -A L -V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0214387_CDS_0050 L S E K H -A N L A K R N R E R A E Y Y K R L M A L V E S A E -R L P E T K -E D -A E (104)
E + + + V + R+ + ++
AcrIE1 G L E E -A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;