3D Structure for MGV-GENOME-0214387_CDS_0050 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.76 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0214387_CDS_0050 1 AcrIE6 0.73 View Alignment MGV-GENOME-0214387_CDS_0050 M R K L I L S G D D W F E L K H T L E -L -F A I V T N N A A N E Y E N M A A -H E -R A A E L S E K H A N L A K R N R (60)
M L + + +A E + +
AcrIE6 M -N -N -D ---T E V L E ----Q -Q -I K A F E L L A D E L K D R L P T L -E I L S P M Y T A V M V T Y D L I G
MGV-GENOME-0214387_CDS_0050 E R A E Y Y K R L M A L V E -S ---A E -R L P E -T K E D A E (93)
+ + + + K
AcrIE6 K Q L A S R R A E L I E I L E E Q Y P G H A A D L -S I K N L C P
MGV-GENOME-0214387_CDS_0050 2 AcrIE1 0.68 View Alignment MGV-GENOME-0214387_CDS_0050 M R -K L ---I -L -S G -----------D D W F E L K H T L E L F A I V T N N A A N E Y E N M A A H E R A A E (60)
M KL + E+ L L + ++ A R
AcrIE1 M E K K L S D A Q V -A L -V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0214387_CDS_0050 L S E K H -A N L A K R N R E R A E Y Y K R L M A L V E S A E -R L P E T K -E D -A E (104)
E + + + V + R+ + ++
AcrIE1 G L E E -A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0214387_CDS_0050 3 AcrIIC4 0.62 View Alignment MGV-GENOME-0214387_CDS_0050 M R K L ---I L ---S G -D D W F ---E L K H T L E L -F A -I V T N -N A A N E Y E -N M A A H E -R A A E -L (60)
M+ + + + + L ++ + +A+ +
AcrIIC4 M K I T S S N F A T I A T -S E N F A K L S V L P K N H R E P I -K G L F -K S A V E -Q F S S A R D F F K N E N -Y -
MGV-GENOME-0214387_CDS_0050 S E -K H A N L A K -R N -R E R -A E Y Y K R L -M -A -L -V -E -S -A E R L P E T K -E D --A E (113)
S K E +E
AcrIIC4 S K E L A E K F N K E -A V N E -A V E K ----L -Q -K -A -I -D -L ------A -E K Q G I Q F
MGV-GENOME-0214387_CDS_0050 4 AcrIF25 0.56 View Alignment MGV-GENOME-0214387_CDS_0050 M R K -L I L ---------S G -D -D W F ------------------E L K -H -T -L E -L -F A -I -(60)
M +
AcrIF25 M D N D D K K P D A L I H L R V P -A -E V K G R W V K E S R L E G M K L T D W I T G R V E -A -K A -L -S I -A -E
MGV-GENOME-0214387_CDS_0050 V -T -N -N A A N -E Y E N M A A H E ---R -------A A E ---L -S -E -K H -A -N -L -A --K R -N -(120)
AA + + +
AcrIF25 -V -L -E E A A -A -M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q -A -A -R F -S -A -A -T D D A T -R
MGV-GENOME-0214387_CDS_0050 R -E R ----A E Y Y K R L M -A L V -E S A --------E -------------------R L ------(180)
A L
AcrIF25 -L -D A A L W A R E G Y Q L L S S G -L P D S Y S G A V P N E -G R T G W V T A S Q M A R L F G G E A L -W I E R C Q
MGV-GENOME-0214387_CDS_0050 --P -E -T K E D -A E (193)
+
AcrIF25 Q E L G -G A G K E D G R
MGV-GENOME-0214387_CDS_0050 5 AcrIF23 0.55 View Alignment MGV-GENOME-0214387_CDS_0050 M R -K -L -I L -------S G ------D ---D W F ----E L K ---H T L E ---------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L -E T G I A Y D P S Y N Y A A N T ----R R A S L S P R G I D A R A V
MGV-GENOME-0214387_CDS_0050 --------------------L F A I V T N N A A N E Y E N M A A H E -R ---A A E L S E K H A N L A K R N (120)
+ + N A ++ + + +
AcrIF23 A K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C -D -P S G L L T A A K F W I E N R N D S
MGV-GENOME-0214387_CDS_0050 R E R A E Y Y K R L M A L V ----E -S -A -E R L ---------P E T K E -D ---A -E (169)
+ ++ +
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H -R -S -A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;