3D Structure for MGV-GENOME-0205992_CDS_0024 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.65 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0205992_CDS_0024 1 AcrIE1 0.71 View Alignment MGV-GENOME-0205992_CDS_0024 M D -N L S A Q Q K L M G N M Q A T -S A E L L S -G I M E -E -R G R G F A -S D -R E A W A Q L K E N I E N V E -S (60)
M+ L + + + E A++ I +
AcrIE1 M E K K L ---S D A ---Q V -A L -----V A -A W R K -Y -P D L -R E -S L -E E A A S I L S L I V F Q A E T
MGV-GENOME-0205992_CDS_0024 R M K A I K D V H K D M W R A V K D -H N -G -D A F -C -A L A G E F ---Q R S A I L L A M E W T N A S V L A N I A (120)
R A + + + V ++
AcrIE1 L S D -Q A N E L A N Y I R R Q G L E E -A -E G A -C -R -N I D I M R A K W V E V -C G E V N Q H G I R V Y G D A I
MGV-GENOME-0205992_CDS_0024 V L H G E -D -E (129)
+
AcrIE1 D R ---D -V D
MGV-GENOME-0205992_CDS_0024 2 AcrIE6 0.69 View Alignment MGV-GENOME-0205992_CDS_0024 M D N L S A Q Q K L M G N M Q A T S A E L L S G I M E E R G R G F A S D -R E A W A Q L K E N I E N V E S R M K A I K D (60)
M + + L + + LK+ + ++E
AcrIE6 M N --N D T E V L E ----Q Q --------I -------K A F E -L L A D E L K D R L P T L E I L S -P M Y T
MGV-GENOME-0205992_CDS_0024 V H K D M W R A V K D H N G D A F C A L A G E F Q R -S A I L L -A M E W T N A S V L A N I A V L H -G E D -E (116)
+ ++ E + +A + +
AcrIE6 A V M V T Y D L I G K Q L A S R R A E ----L -I E -----I -L E E Q Y P G H A A D L S I --K -N L C P
MGV-GENOME-0205992_CDS_0024 3 AcrIIC4 0.63 View Alignment MGV-GENOME-0205992_CDS_0024 M D N L S A Q Q K L M G N M -Q A T S A E L L S G -I -M E E R G R G F A S D R E A W A Q L K E N I E N V E S R M K A I (60)
M + ++ E +A L N K +
AcrIIC4 M K -I -T S S N F ----A -T --------I -A ----T -----S -E N F A K L S V L P K N H R E P I K G L
MGV-GENOME-0205992_CDS_0024 K D V H K D M W R A V K D H N -G -D A F C -A L A G E F Q R S A I L L A M E W T N A S V L A N I A -V L H G E D E (118)
+ + ++D LA F++ A+ ++ A G
AcrIIC4 F K S A V E Q F S S A R D F F K N E N Y S -K E L A E K F N K E A V N E -A V E K L Q K A I D L -A E K -Q G I Q F
MGV-GENOME-0205992_CDS_0024 4 AcrIC3 0.61 View Alignment MGV-GENOME-0205992_CDS_0024 M D N L S A Q Q K L M G N M Q A -T S -A E L L S G I M E E R G R -G F A S D -R E A W A Q L K E N I E N V E -S R -M (60)
M +++++ + E G A + +
AcrIC3 M S -I Q V T S T -N ---G R T V N L E ------I -E L G -S V V A -S S -G Q V K F M A D K T ---D R G -L E
MGV-GENOME-0205992_CDS_0024 K --A I ---K -D -V H K D M W R A V K D H N G D A F C A L A G E F Q --R S A I L L A M E -W T N A S V L A N I A (120)
+ A+ + +A AL E A M A+I
AcrIC3 S R F --L V P -E -A G N R R I E V A L T G R D L E A A N A L F S E L A A S V E A T N E -M Y R -E L D A E R A Q I N
MGV-GENOME-0205992_CDS_0024 V L H G E D -E (128)
+
AcrIC3 K A L ---E G
MGV-GENOME-0205992_CDS_0024 5 AcrIF23 0.57 View Alignment MGV-GENOME-0205992_CDS_0024 M D N L S A Q Q K L M G N M Q A T S A E L L S G -I M E -E -R ----G R ---------G F A S D -R E A W A Q L (60)
M N + ++ +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W -I D L -E T G I A -Y D P S Y -N Y A A N T R R A S L S P -R G I D A R A V
MGV-GENOME-0205992_CDS_0024 K E N I -----E N V -E S R M K A I K D V H K D M W R A V K -D -H N G D A F C A L A G E F Q R S A I L L A M E W T (120)
+ + ++ + + A + +
AcrIF23 A K T F G G R A L T G -T A R Q K E W A E K I R A E K V Q Q M -N -Q D Q -A E M A C D P S G L L T A A K F W I E N R N
MGV-GENOME-0205992_CDS_0024 N -A S V ---L A -N I A V L H -----------------------G -E ----D --E (171)
A+ + + +L
AcrIF23 D S A Q E I A G F V M Q Q K A L -L A Q H R S A K A A G Q A D K V A K I A A E Y -N A L T A R -W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;