3D Structure for MGV-GENOME-0202629_CDS_0007 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.42 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0202629_CDS_0007 1 AcrIE1 0.70 View Alignment MGV-GENOME-0202629_CDS_0007 M T K Q E F T E L T G I N P T E E E F D -R -I H E L Y M A T G A E M D K Q S F C A A Y K S -C K D M T -L -V N -A L (60)
M ++++ +
AcrIE1 M -E K K L S D A Q -----V ----A -L -V A A W R K ----------------Y ---P -D -L -R E --
MGV-GENOME-0202629_CDS_0007 Y H S L A F S I N R L -R -E -E R D -R -I E K E R K E D R -K -K -L -E -D L -W E K T D E A V F N I L K M S -E (120)
+ E + + ++
AcrIE1 ---------S -L -E -E A A -S -I L --------S -L -I -V -F -Q A -E T L S D Q A N E L A N Y I R -
MGV-GENOME-0202629_CDS_0007 D A P D E N H A I L N S I A V S L V G K F E V C M A K L D -R G Y V M D A -E -E R E Y F Y D K I A D L R N K C E G F E (180)
E + + K+ + +G + + + +
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I ----R -V Y G D -------A I D -R --D V D
MGV-GENOME-0202629_CDS_0007 2 AcrIE6 0.62 View Alignment MGV-GENOME-0202629_CDS_0007 M T K Q E -F T E L T G I N P T -E E E F D R I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L V N A L Y -H S (60)
M + + +
AcrIE6 M -N N -D T E -V L -----E ----Q -Q -------------------------------I -K -A
MGV-GENOME-0202629_CDS_0007 L A F S I N R L R E E R D R I E K E R K E D R K K L E D L W E K T D E A V F N I L K M S E D A P D E N H A I L N S I A V (120)
+ L++ +E + D + +++
AcrIE6 F E L L A D E L K D R L P T L E I -L ---S P M Y T A V M V T Y D L I G K Q L A --------S ----------
MGV-GENOME-0202629_CDS_0007 S -L V G -K -F -E -V C M A K L D R G Y V M D A E E R E Y F Y D K I A D L R N K C E G -F -E (169)
G A K
AcrIE6 -R -R A E -L -I -E -I L E E Q Y P G ---H A --A -D L ------S I -K -N -L -C P
MGV-GENOME-0202629_CDS_0007 3 AcrIIA11 0.60 View Alignment MGV-GENOME-0202629_CDS_0007 M T K ---Q E F T E L T -G I N -P T --E E E F D R --I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L V (60)
M F E E + + K
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D -D -K A L A G R L A K I W G I L K G ----
MGV-GENOME-0202629_CDS_0007 N A L Y H S L A -F -S I -N -R L R E E R D R I E K E R K E D R K K L E D L W E K T D E A -V F N I L K M S E D A P D (120)
+ ++ + + +D + E L E + + F ++ +
AcrIIA11 -I T S D Y I L D -N -Y R -V W F K N N C P M V G P L -Y D D V R -F E P L D E E Q R D E L Y F G V A I D -D K R -R
MGV-GENOME-0202629_CDS_0007 -E N H A -I L ---N S ------------I A V S L V -G K F E V C M A K L D R G ---Y V M ----D A E E R (180)
+ I N + + + +E E
AcrIIA11 E K -K Y V I F T A R N -D Y E N E C G F N N V R E V R Q F I N -G W E D E L K N E -E F Y K A R E K K R Q E M E E A N
MGV-GENOME-0202629_CDS_0007 E Y F Y D K I A D L R N K C E G -F -E (200)
F + + +
AcrIIA11 N K F A E I M Q R A D E I L W N L K E D
MGV-GENOME-0202629_CDS_0007 4 AcrIC3 0.59 View Alignment MGV-GENOME-0202629_CDS_0007 M T K Q E F T E L T G I N P T E E E F D R I H E -L Y M A T G A -E M D K Q S F C A A Y K S C K D M T L V N A L Y H S L (60)
M+ T +G +
AcrIC3 M S I -Q V T S T N G R T V ---------N L -------E ----------I ----------E -L ---
MGV-GENOME-0202629_CDS_0007 A F S I N R L -R E E R D R I E K E R K E D R K K -L -E D L W -E -K -T D E -A V F -N I -L K -M S E D A -P D -(120)
+ D + L E
AcrIC3 G S V V A S -S -----------G Q ----V -K -F M A D -K -T -D R G -L E S -R F L -V -P E A G N R -R
MGV-GENOME-0202629_CDS_0007 E N H A I L N -S -I A V S -L V G K F E V C M A K L D R G -Y -V M D A E E R E Y F Y D K I A D L R N K C E G F E (178)
A+ + + F A E A +
AcrIC3 I E V A L T -G -R D L E -A A N A L F S E L A A ----S V -E -A T N E M Y R E L D A E R A Q I N K A L -E -G
MGV-GENOME-0202629_CDS_0007 5 AcrIF23 0.57 View Alignment MGV-GENOME-0202629_CDS_0007 M -T K Q E F T E L T G I N P T E E E F D R I H E -L Y M -A -T G A E M D K Q S -F C A A Y K S -C -----K D M T (60)
M + Q + + I TG+ D + A + D
AcrIF23 M T N F Q T W L D S A D I P -V Q Q ----N G Q W -I D L -E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R
MGV-GENOME-0202629_CDS_0007 L -V N A L Y H S L A F S I N R L R E E R D R I E K E R K E D R K K L E D L W E K T D E A V F N I L K M S E D A P D E N (120)
+ + ++ ++ +EK R E +L +
AcrIF23 A V A K T F G G R A L T G T A ---R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R
MGV-GENOME-0202629_CDS_0007 H A I L N S I A V S L V G K F E V C M A K L D R G Y V -M D A E E R E Y F Y D K I A D L R N K C E G F -E (173)
+ ++ V + A + + +A+ +
AcrIF23 N D -S A Q E I A G F V M Q Q K A L L A Q H R S A K A A ---G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;