3D Structure for MGV-GENOME-0202528_CDS_0059 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 95.40 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0202528_CDS_0059 1 AcrIE6 0.76 View Alignment MGV-GENOME-0202528_CDS_0059 M K E L K T M T E ---H Q L L S M A Y E I L L R N I E H E E E I N D R T K K E Y G R D N C I C Q Y R L N V Y N E Q F A (60)
M + + + L + E + L +
AcrIE6 M N N D T E V -L E Q Q I K A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0202528_CDS_0059 E V R -E R I L E I E -H -N -N ---A E (82)
E+ E
AcrIE6 E I L E E Q Y P G H -A A D L S I K N L C P
MGV-GENOME-0202528_CDS_0059 2 AcrIE1 0.66 View Alignment MGV-GENOME-0202528_CDS_0059 M -K E L K T ---M ----------T E ---H ----Q L L S M A Y E -I -L -L -R -N -I E -H E E E -I N (60)
M K L ++LS + +
AcrIE1 M E K K L S D A Q V -A L V A A W R K Y P D L R E S L E E A A S I L S L I V -F -Q -A -E -T -L S -D Q -A N E L A
MGV-GENOME-0202528_CDS_0059 D R T K K E Y G R D N C I C ----Q Y -R L N V Y N E Q F A E V -R -E -R -I -L E I E H N -N ---A E (115)
++ + E E + + ++
AcrIE1 N Y I R R Q G L E E A E G A C R N I -D I M R A K W V E V C G E -V -N -Q -H -G I R V Y G D A I D R D V D
MGV-GENOME-0202528_CDS_0059 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0202528_CDS_0059 M K -E ---L K T M ---T E --------H -Q -L L S -M -A -Y E -I L L R -N I -E H E E E I N D R T K K E (60)
MK T + + + E K
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P -K -N H R -E -P -I -K G L -F K S -A V E -Q F S S A R D F F K N
MGV-GENOME-0202528_CDS_0059 Y G R D N C I C Q Y R L N -V -Y -N E Q F A -E V R -E R I L E I E H N N --A E (102)
+ NE + ++++ +
AcrIIC4 E N Y S K E L A E K F N K E -A -V N E A -V E K -L Q K -A I D L A E K Q G I Q F
MGV-GENOME-0202528_CDS_0059 4 AcrIF23 0.59 View Alignment MGV-GENOME-0202528_CDS_0059 M K E L K -T ---M -------------------------------------------------(60)
M
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0202528_CDS_0059 ----------------T E H Q L L S -M -A Y E -I -L L R -N I E H E E E I N D R T K K E Y G -R -D N C - (120)
+ + K N
AcrIF23 G R A L T G T A R Q K E W A E K I R A E K V -Q -Q -M N Q -D -Q A E -M A C D P S G L L T A A K F W -I E N R N -D
MGV-GENOME-0202528_CDS_0059 ---I C Q -Y R L N V -Y -N E -Q F A -E V R -E R I ------------L E I E H N N ---A -E (174)
+ + + +
AcrIF23 S A Q E I -A G F V M -Q -Q -K A L -L A -Q H R S A -K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0202528_CDS_0059 5 AcrIC3 0.56 View Alignment MGV-GENOME-0202528_CDS_0059 M K -E L K T M --------------T E ---------H Q L L S M A -Y E ---I L L -R N I E -H E E --(60)
M + + ++ +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E -S R F L V -P E A G N R R I -E V
MGV-GENOME-0202528_CDS_0059 -E -I N D R T K K E Y G R D N C I C Q Y R L N V Y N E Q F A E V R E R I L E I E H N N -A E (107)
+ R + + NE E+ + I
AcrIC3 A -L -T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N -K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;