3D Structure for MGV-GENOME-0202161_CDS_0036 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.70 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0202161_CDS_0036 1 AcrIE6 0.66 View Alignment MGV-GENOME-0202161_CDS_0036 M T -D E E A L K A R I D E L I E N L N Y Y L R N Y N R L V V ------I -G ---Y ----R K A I ----L D A E (60)
M+ D E+L I + L + + A L
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0202161_CDS_0036 I E S L K E -E -I -K R L -S ---K Q (81)
+E L
AcrIE6 L E E Q Y P G -H -A A D L S I K N L C P
MGV-GENOME-0202161_CDS_0036 2 AcrIIC4 0.57 View Alignment MGV-GENOME-0202161_CDS_0036 M -T D E E A L K --------A -------R ----I D E L I E N L N -Y Y L R N Y -N R L V ----V -I --(60)
M A I L ++ +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D -F F K N E N -Y S K E
MGV-GENOME-0202161_CDS_0036 -G --Y R K -A I L D A E -I E S L K E E I K R L S ----K Q (93)
++ +E L I +
AcrIIC4 L A E K -F N K E A V N E -A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0202161_CDS_0036 3 AcrIF23 0.52 View Alignment MGV-GENOME-0202161_CDS_0036 M -T D E E A L K ----------A R ---------------I -----------------------(60)
M + L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q -W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0202161_CDS_0036 ------------D E ------------L --------I E N L N Y Y L R -N Y -N R L V V ----I -G (120)
+ + + L +
AcrIF23 G G R A L T G T A R Q K E -W A E K I R A E K V Q Q -M N Q D Q A E M A C D P S G L L -T A -A K F W I E N R N D -S A
MGV-GENOME-0202161_CDS_0036 -------Y -R K A ------------I L -D -A -E I E S L K E E I K R L S -K --Q (169)
+ + E L+ +
AcrIF23 Q E I A G F V -M Q Q K A L L A Q H R S A K A A G -Q -A -D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0202161_CDS_0036 4 AcrIE1 0.50 View Alignment MGV-GENOME-0202161_CDS_0036 M -T ----D E E A L -K ----A ----R ----I ----D E ----L ---I E N ----L -N Y Y L R N Y N (60)
M A + +E+ N +
AcrIE1 M E K K L S D A Q V A -L -V A A W R K Y P D -L R E S -L E E A A S I L S L I V F Q A E T L S D Q -A N E L A N Y I R
MGV-GENOME-0202161_CDS_0036 R L V V -I G ----Y -R K ----A I -L D A E I -E -S -L -K -E E ----I -K R L -S --K -Q (114)
R + A
AcrIE1 R Q G L E E A E G A C -R N I D I M R A -K W V E V -C -G -E -V -N Q H G I R V -Y G D -A I D R D V D
MGV-GENOME-0202161_CDS_0036 5 AcrIC10 0.49 View Alignment MGV-GENOME-0202161_CDS_0036 M -T -D E E A ---L K ----A ---R I -----------D -E -----------------------(60)
M
AcrIC10 M T K I N P -E W L A F N N L I N E G G E G -F N P H P K Y I S A T A T -A Q A P I V A N S A G K V Y R D S R G M P I D
MGV-GENOME-0202161_CDS_0036 L -I E -N -L N Y Y L R N Y N R L V V I G Y R K A -I -L D -A E -I -E -S -L -K -E -E I K R L S K Q (115)
+ + R+ ++
AcrIC10 -P L -A -Q I A D A E T R L A R V ----T D P -F -G R -E -L I -E -R -S -I -A -N -Y R K M L E A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;