3D Structure for MGV-GENOME-0200415_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 92.73 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0200415_CDS_0006 1 AcrIE1 0.83 View Alignment MGV-GENOME-0200415_CDS_0006 M R -K L ---I -L -S G -----------D D W F E L K H T L E L F V I E T N N A A N E Y E N M A A H V R V A E (60)
M KL + E+ L L V ++ A +R
AcrIE1 M E K K L S D A Q V -A L -V A A W R K Y P D L R E S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0200415_CDS_0006 F S E R Y A N L A K R N G E R T E N C K R L I A L V E S A E R L -Q E T K E -E -T --N -G (107)
E + + + V +
AcrIE1 G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y -G --D A I D R D -V D
MGV-GENOME-0200415_CDS_0006 2 AcrIC3 0.82 View Alignment MGV-GENOME-0200415_CDS_0006 M R K L I L S -G -------D D W F E L K H T L E ---L -F V I ---E -T N ----N A A N E Y E N M A A H V R (60)
M + S + + + + + + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K -F M A D K T D R G -L E S R F L V P E A G N R R I E V A L
MGV-GENOME-0200415_CDS_0006 V A E F S E R Y A N L A K R N G E R T E N C K R L I A L V E S A E R L Q E T K E E T N G (104)
E L E ++ G
AcrIC3 T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q --I N K A L E G
MGV-GENOME-0200415_CDS_0006 3 AcrIE6 0.82 View Alignment MGV-GENOME-0200415_CDS_0006 M R K L I L S G D D W F E L K H T L E L F V I E T -N N A A N E Y E N M A A -H V R V A E F S E R Y A N L A K R N G E R (60)
M L + + +A E + + G
AcrIE6 M N --N -D ---T E V L E Q Q ----I K A F E -L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q
MGV-GENOME-0200415_CDS_0006 T E N C K R L -I A L V E S A E R L -Q E ----T K E E T N G (92)
+ + I ++E +
AcrIE6 L A S R R A E L I E I L E E Q -Y P G H -A A D L S I K N L C P
MGV-GENOME-0200415_CDS_0006 4 AcrIF2-IC2 0.82 View Alignment MGV-GENOME-0200415_CDS_0006 M -R K -L I L ---S G D D W F E L K H T L E L ---F V I ---E T N N A A N -E Y E N M A A -H V R V A E F S E -(60)
M K + + D + +E+ + + + S
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A A E A I A I A K D Q V W D G -----E G ----Y -T K Y T F D D N S V L
MGV-GENOME-0200415_CDS_0006 --R Y A N L A K R N G E R T E N C K R L I A L V E S A E R L -Q E ----T -K E -E T -N G (108)
+ + ++ K + ++ R
AcrIF2-IC2 I Q S G T T Q Y A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L -E S V E E E
MGV-GENOME-0200415_CDS_0006 5 AcrIF2 0.82 View Alignment MGV-GENOME-0200415_CDS_0006 M -R -K L I L ---S -G -D D W F E L K H T L E -L F V I -E T -N N A A N E Y E N M A A -H V R V A E F S E ---(60)
M + E+ + V + + S
AcrIF2 M I A Q Q H K D T V A -A -C E A -A E A I A I A K D Q -V W D G E G ----------Y -T K Y T F D D N S V L I Q
MGV-GENOME-0200415_CDS_0006 R Y A N L A K -R N G E R T E N C K R L I A L V E S A E R L -Q E --T --K -E -E T -N G (107)
+ + ++ K + ++ R
AcrIF2 S G T T Q Y -A M D A D D A D S I K G Y A D W L D D E A R S A E A S E I E R L L -E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;