3D Structure for MGV-GENOME-0199493_CDS_0032 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.92 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199493_CDS_0032 1 AcrIE1 0.73 View Alignment MGV-GENOME-0199493_CDS_0032 M T K Q E F T E L T G I N P T E E E F D -K -I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L -V N -A L Y H (60)
M ++++ + +
AcrIE1 M -E K K L S D A Q -V --------A -L -V A A W R K ---------Y ---------P D -L R -E ----
MGV-GENOME-0199493_CDS_0032 S L A F S I N R L K E E R D -S I E E E R D R I E K E R K E D R -K -K -L -E -D -L -W E K T D A A A V K I L D V A (120)
L E + E A ++ +
AcrIE1 -------S L E E A A -S I L ---------------S -L -I -V -F -Q -A -E T L S D Q A N E L A N Y I
MGV-GENOME-0199493_CDS_0032 E R T T N P D H A D F L N K A A V S L V G Q F D V C M T K L E K -G Y A M D E E -E -R N F L I D E -I -Y R L K G (178)
R+ + A+ + + + + + G R
AcrIE1 R R Q G L -E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R ----V -Y G D ----A I -D -R D V D
MGV-GENOME-0199493_CDS_0032 2 AcrIC3 0.60 View Alignment MGV-GENOME-0199493_CDS_0032 M T K Q E F T E L T G I N P T E E E F D K I H E -L Y M A T G A -E -M D K Q S F C A A Y K S C K D M T L V N A L -Y H (60)
M+ T +G +
AcrIC3 M S I -Q V T S T N G R T V ---------N L -------E -I --------------------E -L --
MGV-GENOME-0199493_CDS_0032 S L A F S I N R L K E -E R D S I E E E R D R -I E K E R K E D R K K L E D L W -E -K -T D A -A -A -V ---K I L (120)
+ + D +
AcrIC3 --G S V V A S S -G Q ----V K F ----M ---------------A D -K -T -D R G -L E S -R F L -V -
MGV-GENOME-0199493_CDS_0032 D V A E R -T T N -P D H -A D F L N K -A -A V S L V G Q F D V C M T K L E K G Y A M D E E E -R N -F L -I -D E I (180)
E N + + + F +E M E I
AcrIC3 -P -E -A -G N R R I -E V A L T G -R -D L E A A N A L F S E L A A S V E A T N E M Y R E -L D -A E -R -A -Q I
MGV-GENOME-0199493_CDS_0032 -Y -R L -K -G (189)
G
AcrIC3 N -K A -L -E G
MGV-GENOME-0199493_CDS_0032 3 AcrIE6 0.60 View Alignment MGV-GENOME-0199493_CDS_0032 M T K Q E F T E L T G I N P T E E E F D K I H E L Y M A T G A E M D K Q S F C A A Y K S C K D M T L V N A L Y H S L A F (60)
M ++ +
AcrIE6 M -N N D T E V -L --E ------Q ----Q --------------------------------I K A
MGV-GENOME-0199493_CDS_0032 S I N R -L -K E E R D S I E E E R D R I E K E R K E D R K K L E D L W E -K -T D -A A A V K I L D V A E R T T N P D (120)
E +D + E A+ V
AcrIE6 F E L -L -A D E L K D R L P T L ----E I L -----------S -P -M -Y T A V M V T Y D ----------
MGV-GENOME-0199493_CDS_0032 H A D -F -L -N K A A V S L V G Q F D V C M T K L E K G Y A M D E E E -R N -F L I D E I Y R L K G (171)
K ++S G A I L
AcrIE6 ---L -I -G -K Q L A S R R A E L I E I L E E Q Y P G H A -----A --D L ---S I K N L C P
MGV-GENOME-0199493_CDS_0032 4 AcrIF23 0.59 View Alignment MGV-GENOME-0199493_CDS_0032 M -T K Q E F T E L T G I N P T E E E F D K I H E L Y M -A -T G A E -----M D K -Q S -F C A A Y K S -C K D M T (60)
M + Q + + I + TG+ ++ + D
AcrIF23 M T N F Q T W L D S A D I P V Q -Q ----N G Q W I D L -E T G I A Y D P S Y N Y A A N T R R A S L S P R G -I D A R
MGV-GENOME-0199493_CDS_0032 L -V N A L Y H S L A F S I N R L K E E R -D S I E E E R D R I E K E R K E D R K K L E D L W E K T D A A A V K I L D V (120)
+ + ++ R KE R E +L +
AcrIF23 A V A K T F G G R A L T G T A R Q K E W A E ----K -------I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A
MGV-GENOME-0199493_CDS_0032 A E R T -T N P D H -A D -F L N K A A V S L V G Q F D V C M T K L E K G -----Y A M -D E -E E R N F L I D -E I (180)
A ++ V Q + A
AcrIF23 A K F W I E --N -R -N D -S A Q E I A G F V M Q Q K A L L A Q H R S -A K A A G Q A D K V -A K I A A E Y N -A L T
MGV-GENOME-0199493_CDS_0032 Y R L K -G (186)
R
AcrIF23 A R -W G F
MGV-GENOME-0199493_CDS_0032 5 AcrIIA11 0.58 View Alignment MGV-GENOME-0199493_CDS_0032 M T K Q E F T E L T G I N P T E E E F D K I H E -L Y M A T G A E M D K Q S F C A A Y K -S -C ----K D M T L V N A (60)
M + +
AcrIIA11 M A D M T L R Q F C E R Y R K -G -----D -F -L A K D R E T Q I E A G W Y ---D W -F -C D D K A L A G R L A K
MGV-GENOME-0199493_CDS_0032 L Y H S L A F -S I N R L K E E R D S I E -E E R D -R I E K -E R K E D R K K L E D L W E K T D A -A A V K I L ---(120)
+ L + + + +D + E L E + + ++
AcrIIA11 I W G I L K G I T S D Y I L D N Y R V W F K N N -C P -M V G P L -Y D D V R F -E P L D E E Q R D E L Y F G V A I D D
MGV-GENOME-0199493_CDS_0032 D ---V A E R -T ----T -N P D ---H -A D F L N K A A V -S L V G Q F D V C M T K L E --K G -------Y (180)
+ + + + G D E K
AcrIIA11 K R R E K K Y -V -I F T A R N D Y E N E C -G F -N N V R E V R Q F I N G W E D E L -K N E E F Y K A R E K K R Q E M
MGV-GENOME-0199493_CDS_0032 A M ----D E E E R N F L I D -E I Y R L K -G (205)
E + + + LK
AcrIIA11 E E A N N K F A E I M Q R A D -E I L W N L K E D
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;