3D Structure for MGV-GENOME-0199452_CDS_0043 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.04 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199452_CDS_0043 1 AcrIE1 0.72 View Alignment MGV-GENOME-0199452_CDS_0043 M -N -S D K F ---L -N ---K ----F ----T Y L I L C V F -V S V V C F G F Y -K Q Y E A N Q -N L -Y D K (60)
M L K ++ + + Q
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L -R E S L E E A A S I L S L I V F Q A E T L S D -Q A N E L A N Y -I R R Q
MGV-GENOME-0199452_CDS_0043 V F R L E R Q N -A -E I -T -E -Q -V -D K L N K -T I D A -E I A K N L K E V A E R N N V -G -G (112)
K + V
AcrIE1 G L E E A E G A C -R -N I -D -I -M -R A K W V -E V C G -E -V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0199452_CDS_0043 2 AcrIC3 0.64 View Alignment MGV-GENOME-0199452_CDS_0043 M N S D --K -F L ---N ----------K -F -------------T ---Y L I L C ----V F V S V V C (60)
M+ N + + V
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A ---
MGV-GENOME-0199452_CDS_0043 F -G F -Y -K Q Y E A N Q N L Y D K V F R L E R -Q -N -A E I T E Q V -D K L N K T I D A E I A K N L K E V A E R N (120)
+ A + N + +
AcrIC3 -L T -G -R ----D L E A A N A L F S ----E -L -A A S V ----E -A T N E M Y R E L D -A E R A Q I N -K -
MGV-GENOME-0199452_CDS_0043 N V G G (124)
+ G
AcrIC3 A L E G
MGV-GENOME-0199452_CDS_0043 3 AcrIE6 0.59 View Alignment MGV-GENOME-0199452_CDS_0043 M N S D K ---F L -N K F T Y L I L C V F V S V V C -F G F Y K Q Y E A N Q N L Y D K V -F R L E R Q N A E I T E Q V (60)
MN L + ++ L + + I Q+
AcrIE6 M N -N -D T E V L E Q Q I K A F E ------L L A D -E L K D R L P T L E I L S P M -Y T A V M V T Y D L I G K Q L
MGV-GENOME-0199452_CDS_0043 D K L N K T I D A E I A K N L K -E -V A E R N --N -V G G (91)
+ + + +A+ + +
AcrIE6 A S R R A E L I E I L E E Q Y P G -H A A D L S I K -N L C P
MGV-GENOME-0199452_CDS_0043 4 AcrIIA19 0.56 View Alignment MGV-GENOME-0199452_CDS_0043 M N -S D K F L ----N ----K ----F ------------------T Y L I ----------L -C -V (60)
M L
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T K P Y E L R L D L S E R Y S N R D L -I E
MGV-GENOME-0199452_CDS_0043 F ---V S V V C F G F -Y K Q Y E -A N Q N L Y D K V -F -R L E R Q N A E -I T E Q V D K L N K T I D A E I A K N L (120)
F + C N + + + + + D +K
AcrIIA19 F K F M L I E Y C K E A L Q -D I K E -L A N S D E A -Y -E -T D E A F E A V F R Q L F E E V I S N P D T V -L K A F
MGV-GENOME-0199452_CDS_0043 K E V A E R N N V G G (131)
+
AcrIIA19 H S Y T S F L E E N K
MGV-GENOME-0199452_CDS_0043 5 AcrIF4 0.55 View Alignment MGV-GENOME-0199452_CDS_0043 M N S D K --F L -N ---K --------F ------------T --------Y L I -L --C V --F V S V (60)
M + + +
AcrIF4 M M T I S K T D I D C Y L Q -T Y V V I D P V S N G W Q W G I D E N G V G G A L H H G R V E M V E G E N G Y F G L R --
MGV-GENOME-0199452_CDS_0043 V C F G F -Y K Q Y E A N Q N L Y D K V F R L E R -Q -N -A E I T E Q V D K L -N K -T -I D A E I A K N L K E V A E (120)
+ + + A + + E+ E
AcrIF4 -G A T -H P -------T E K E A M A ----A -A -L G Y L W K C ----R -Q D -L -V A I A R N D A I E A -E
MGV-GENOME-0199452_CDS_0043 R N N V G G (126)
+ +
AcrIF4 K Y R A K A
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;