3D Structure for MGV-GENOME-0199452_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 96.63 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199452_CDS_0042 1 AcrIE6 0.87 View Alignment MGV-GENOME-0199452_CDS_0042 M L E D ---K I A Q L E ----H -A K E -C -Y L R D L -R P E H M A I V R K S -------F ----G L Q V A S (60)
M + Q + ++ +
AcrIE6 M -N N D T E V L E Q Q I K A F E -L L A -D -E L K D R -L P -T L E I L -S -P M Y T A V M V -T Y D L I G K Q L A
MGV-GENOME-0199452_CDS_0042 K R R D W L K K Q V K R C -D E E -I -K F L E -E -R R C Q (91)
RR L + L C
AcrIE6 S R R A E L I E I L E E Q Y P G -H -A A D L S I -K N L C P
MGV-GENOME-0199452_CDS_0042 2 AcrIE1 0.87 View Alignment MGV-GENOME-0199452_CDS_0042 M L ---E -D K I A Q L E --------------H --------A -K -E -C Y L R -D L ----R P E H M A (60)
M D + L + L
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D L R E S L E -E A A S I L S L -I -V -F -Q A E T -L S D Q A N E L A N Y
MGV-GENOME-0199452_CDS_0042 I V R K S --F G L Q V A S K R R D W L K K Q V K R C D E ----E -I K F L -E E R ---R C -Q (110)
+R++ + A + D + + +
AcrIE1 -I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D -V D
MGV-GENOME-0199452_CDS_0042 3 AcrIIA33 0.83 View Alignment MGV-GENOME-0199452_CDS_0042 M L E ---D K I -----A Q L --------E ----------------H --------A -K ----E C (60)
M+ ++
AcrIIA33 M I K W T G K S T D K G W I R T V E A E T Y Y K L L E T L V D K G Y I G D Y I D S D S Q L F H E L A Y -V -S P A V A D
MGV-GENOME-0199452_CDS_0042 Y L R D L ------R P E H M A I -V R K S F G L Q V A S K -R -R D W L K K Q V K R C -D E E I K F L E E R R C Q (119)
L V K + C E
AcrIIA33 L E D R L N D E H Q V E Q A L E D -L -E N F D W N R V F E K L -T D Q Q F Q T A I A G C T S Q A Y Y Q E F E V I -E
MGV-GENOME-0199452_CDS_0042 4 AcrIIA34 0.83 View Alignment MGV-GENOME-0199452_CDS_0042 M L --E D K I ----A -Q L --------E ---------------------H -----A -------(60)
M I
AcrIIA34 M K N I A N E I K T I R -Y A -F E D G R S T Q -K S I M R K I K A L T D Q F E T M D D L I -D S L N S Y A D T H Y T W
MGV-GENOME-0199452_CDS_0042 K -E -C --------Y -L -R -D -L -R P E H M A -I ---V R ---K ----S --F G L Q -V A S K R R D W (120)
+ + L + D
AcrIIA34 -A -I -T Y F Q L A R I -I -I -S -F -Q A S -N N T T S E K K I D L Q S G P I E V N G K --L -K -I R V T V D E
MGV-GENOME-0199452_CDS_0042 L K K Q V K --R C D E -E I K F L E E R R C Q (144)
+ E IK L
AcrIIA34 F M A D L A N W E H L E D -I K K L A K E L -A
MGV-GENOME-0199452_CDS_0042 5 AcrIF15 0.82 View Alignment MGV-GENOME-0199452_CDS_0042 M L E D K -I A ----Q L E H A K E -C -Y L R D L -----R P E H -M A I -V R K S F G L Q V A S K R R D W L -K (60)
M + R + + K
AcrIF15 M T T I T I A Y E V S N D K V E T I K T -M V E S Q Q I H N V N F N G E E F -T I E R -G D F -T S I D K ---D -E -
MGV-GENOME-0199452_CDS_0042 -K Q V -K -R -C -D E E -I K F L E E R R C Q (85)
+ +
AcrIF15 A -E H V -K -L -L N K -I -Q D I I H G Y -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;