3D Structure for MGV-GENOME-0199452_CDS_0042 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.63 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199452_CDS_0042 1 AcrIE6 0.73 View Alignment MGV-GENOME-0199452_CDS_0042 M L E D ---K I A Q L E ----H -A K E -C -Y L R D L -R P E H M A I V R K S -------F ----G L Q V A S (60)
M + Q + ++ +
AcrIE6 M -N N D T E V L E Q Q I K A F E -L L A -D -E L K D R -L P -T L E I L -S -P M Y T A V M V -T Y D L I G K Q L A
MGV-GENOME-0199452_CDS_0042 K R R D W L K K Q V K R C -D E E -I -K F L E -E -R R C Q (91)
RR L + L C
AcrIE6 S R R A E L I E I L E E Q Y P G -H -A A D L S I -K N L C P
MGV-GENOME-0199452_CDS_0042 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0199452_CDS_0042 M L -E -D K I A Q L ------------E H ----A K E C Y L R D L ----R P E H -M A I -V -R K S F G L Q (60)
M A++ + + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A -R D F -F -K N E N Y S K E
MGV-GENOME-0199452_CDS_0042 V A S K R R -D W L K K Q V K R C D E E I K F L E E R R C -Q (91)
+A K + + V + I +E
AcrIIC4 L A E K F N K E A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0199452_CDS_0042 3 AcrIF23 0.61 View Alignment MGV-GENOME-0199452_CDS_0042 M L --E D K I A Q ---L E ----------------H A K E -------------------------(60)
M + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P -S Y N Y A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0199452_CDS_0042 ----------------C ----Y L R D L R -------P -E H M A I V R K -S -F ---G L Q V A S --- (120)
+ + ++ F +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A -C D P S G L L T A A -K F W I E N R N D S A Q E I
MGV-GENOME-0199452_CDS_0042 ----K R R D W L K K ------------Q V K R C D E E I K F L E E R R C Q (162)
L V + E L R
AcrIF23 A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0199452_CDS_0042 4 AcrIE1 0.61 View Alignment MGV-GENOME-0199452_CDS_0042 M L ---E -D K I A Q L E --------------H --------A -K -E -C Y L R -D L ----R P E H M A (60)
M D + L + L
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D L R E S L E -E A A S I L S L -I -V -F -Q A E T -L S D Q A N E L A N Y
MGV-GENOME-0199452_CDS_0042 I V R K S --F G L Q V A S K R R D W L K K Q V K R C D E ----E -I K F L -E E R ---R C -Q (110)
+R++ + A + D + + +
AcrIE1 -I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D -V D
MGV-GENOME-0199452_CDS_0042 5 AcrIF25 0.53 View Alignment MGV-GENOME-0199452_CDS_0042 M L E --D ----K -I -----A -------Q -L -E ----------------H ----A K E -----(60)
M A
AcrIF25 M D N D D K K P D A L I -H L R V P A E V K G R W V K E -S -R L E G M K L T D W I T G R V E -A K A L S I A E V L E E
MGV-GENOME-0199452_CDS_0042 --C Y L ----R D L ---------------------------------------------R -- (120)
+
AcrIF25 A A A M A R S L E D S P I F Y R N K L C A D G I V T I Q Q Q A A R F S A A T D D A T R L D A A L W A R E G Y Q L L S S G
MGV-GENOME-0199452_CDS_0042 --P -E H M A I V R K -S -F -G L Q ---V A S K R R D W L K K Q V K R C D E E I K F L E E R R C Q (172)
+V G + + RC E+ +
AcrIF25 L P -D S Y S G A V P N E G R -T G W V T A S Q M A R L F G G E A L W I E R C Q Q E L G G A G K E D G R
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;