3D Structure for MGV-GENOME-0199452_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.92 ;
Download
pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199452_CDS_0009 1 AcrIIA26 0.97 View Alignment MGV-GENOME-0199452_CDS_0009 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y A T A S N L V D E N T L N F V E D N F I E Q N Y K N E (60)
MKKLYIQTNQFANGELQVENTSYELCDTFKELY ASNLVDENTLNFVEDNFIEQNYK E
AcrIIA26 M K K L Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y S V A S N L V D E N T L N F V E D N F I E Q N Y K D E
MGV-GENOME-0199452_CDS_0009 Y D E I Y E N G G D V G E F V W E V F E N K V T E E Q F K E L L V Q L E I S Y D E F D P E E E L A K C I S N K N R K S E (120)
Y +YEN GD GEFV VFENKVTEEQFKELL QLEI+Y EFDPEEELAKCI NKNRKSE
AcrIIA26 Y N G V Y E N D G D T G E F V G Q V F E N K V T E E Q F K E L L E Q L E I T Y T E F D P E E E L A K C I A N K N R K S E
MGV-GENOME-0199452_CDS_0009 F Y G D G L K V I A E Y L E S I S Q E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D L E D G V K F E H V E R A (180)
FYG GLKVIAEYLESIS EDALAVVTYYYFYFGFGYEDQLISDIKDD EDGVKFEHVER
AcrIIA26 F Y G N G L K V I A E Y L E S I S H E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I K D D Q E D G V K F E H V E R S
MGV-GENOME-0199452_CDS_0009 E I I (183)
E I
AcrIIA26 E T I
MGV-GENOME-0199452_CDS_0009 2 AcrIIA33 0.61 View Alignment MGV-GENOME-0199452_CDS_0009 M K K L Y I Q T N Q F A N G E L Q V E N T -S -Y -E -L C D T F K E L Y A T A S N L V D E N T L N F V E D N -F I E Q (60)
M K + +T Y + +LVD
AcrIIA33 M I K W T -G K -S T D -K G W ----I R -T -V -E -A E T ---Y Y K L L E T L V D K ---G -----Y ----
MGV-GENOME-0199452_CDS_0009 N Y -K N E Y -D -E -I -Y E N G G D V G E F V W E V F E N K V T E -E -Q F K E L L V Q L E I S Y D E F D P E E E L (120)
F+EL +
AcrIIA33 --I ----G -D -Y -I ----D S D --------------S -Q L F H E L ----A Y ------V S P A V
MGV-GENOME-0199452_CDS_0009 A K C I S N K N R K S E F Y G -D G L K V I A E Y L E S I S Q E D A L A V V T Y Y Y F Y F G F G Y E -D Q -L -I -S -(180)
A + ++E LE+ +
AcrIIA33 A D L E D R L -N D E ----H -Q V E Q A L E D L E N F D W N R V F E K ---L --------T D Q -Q -F -Q -T
MGV-GENOME-0199452_CDS_0009 D I K D D L E D G V K F E H V E -R A E I -I (203)
I + E+
AcrIIA33 A I A G C T -S Q A Y ---Y Q E -F E V I E
MGV-GENOME-0199452_CDS_0009 3 AcrIIC5 0.55 View Alignment MGV-GENOME-0199452_CDS_0009 M K K -L --Y I Q T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y -A -T -A -S -N L V D E N T L N F V -E D N (60)
M + ++ T L
AcrIIC5 M N N S I K F H V S Y -D ---------G T A R A L F N ---T K -E -Q -A -E -K -Y C L V ----E E I -N D
MGV-GENOME-0199452_CDS_0009 F I E Q N Y K N E Y D E I Y E N G G D V G E F V W E V F E N K V T E E Q F K E L L V Q L E -I S Y D E F D P E E E L A K (120)
E + + + + SY +
AcrIIC5 E M N G ----------Y ----K R K S W E E K L R E -E N C A S V Q D W V E K N Y T S S Y S D L --------
MGV-GENOME-0199452_CDS_0009 C I S N K N -R K -S -E F Y G D G -L K V I -A -E Y L E S I S Q E D A L A V V T Y Y Y F Y F G F G Y E D Q L I S D I (180)
L I + ++ V Y + + +
AcrIIC5 -----F N -I C -E -I ---E V -S S -A -G Q -L V K I D N T E V D D F V E N C Y G F T -L E D D L E E F N K A
MGV-GENOME-0199452_CDS_0009 K D D L E D G V K F E H V E R A E I -I (200)
K L
AcrIIC5 K Q Y L Q K ----F -Y -A E C -E N
MGV-GENOME-0199452_CDS_0009 4 AcrIF13 0.55 View Alignment MGV-GENOME-0199452_CDS_0009 M K K L Y I Q -T N Q F A N G E L Q V E N T S Y E L C D T F K E L Y A T A S N L V D E N T L N F V E D N F I E Q N Y K N (60)
MK L I + E
AcrIF13 M K L L N I K I ---N -E -------F A -V --------T -A -N -T --E -----------------
MGV-GENOME-0199452_CDS_0009 E Y D E I Y E N G G D V G E F V W E V F E N K V T E E Q -F K E L L V Q L E I S Y D E F D P E E E L A K C -I S N K -N (120)
G + + + D +
AcrIF13 ------A --G ---D E L ---Y L -Q -----L ----P ---H -T P D S ---Q H S I ---N -H E -P L
MGV-GENOME-0199452_CDS_0009 R K -S E F -Y G D G -L K V I A E Y L E S I S Q E D A L A V V -T Y -Y Y F Y F G -F G -Y E D Q L I -----S -D (180)
+ EY ++ + Y ED +
AcrIF13 -D D D -D F V K -E V Q E I C D E Y F G -K G D R T L A R L -S -Y A G G Q A Y D S -Y T E E D G V Y T T N T G -D Q
MGV-GENOME-0199452_CDS_0009 I K D -D L E D G V K F E H V E R A E I I (201)
+ D E +A+++
AcrIF13 F V E H S Y A D Y Y N V E V Y C K A D L V
MGV-GENOME-0199452_CDS_0009 5 AcrIIA15 0.53 View Alignment MGV-GENOME-0199452_CDS_0009 M K K -L --Y -I -Q T N Q F ---A N G E L -Q ----V --------E N T -S -Y E L C D T F K E L Y A T A S (60)
M+K + + + + L
AcrIIA15 M R K T I E R L L -N -S E L S S N S I A V R T G -V S Q A -V I S K L R N G K -K E L G N L T L N S A E K L F E Y Q K
MGV-GENOME-0199452_CDS_0009 N L V D E N T L N -F V E D N F I E Q N Y K N E Y D E I Y E N G G D V -G -E F V W E V F E N K V T E E Q F -K -E L L (120)
V Y T E +
AcrIIA15 E M -----E -K -V -------D T W I V Y R G R -----T -A -D M -N K S Y I A E G S T Y E E V Y -N N F V
MGV-GENOME-0199452_CDS_0009 V Q L E I S Y --D E F D P E E E L A K C I S N K N R K S E F Y G D G L K -V I A E Y L E S I S Q E D A L A V V T Y Y Y (180)
++ L K N + DG+ + +
AcrIIA15 D K Y G Y D V L D E D I Y E I Q L L K K N G E N -L D D Y D V D S D G I -N -N Y --------D K L D E F R E S --
MGV-GENOME-0199452_CDS_0009 F Y F G F G Y E D Q L I S D I K D D L E D G V K F E H V E R A E I -I (215)
ED ++ + V
AcrIIA15 --D Y V D L E D Y D Y R E L F E N S S S Q V Y Y H E -F E -I T H E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;