3D Structure for MGV-GENOME-0199241_CDS_0002 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 91.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0199241_CDS_0002 1 AcrIIA12 0.84 View Alignment MGV-GENOME-0199241_CDS_0002 M N -F R E T K E A N R L I -N R I E K L D S F T -M D I Q N ----P A R T L T V S S E F ------D G V R I K K E (60)
M+ ++ LI N + + A + GV +
AcrIIA12 M S K T M Y K N D V I E L I K N A K T N N E E L L F T S V E R N T R E A A T --Q Y F R C P E K H V S D A G V Y Y G E D
MGV-GENOME-0199241_CDS_0002 Y K F K I I Q V L L E M R R -E L A E E L E K L G V T -----E E -V E Y D (99)
F + + + E
AcrIIA12 --F E -F ----D G F E I -F E -----D D L I Y T R S Y D -K E E L N
MGV-GENOME-0199241_CDS_0002 2 AcrIF15 0.83 View Alignment MGV-GENOME-0199241_CDS_0002 M N F R E T K E A N R -L I N R I E K L D S F T M D I -Q N P A R T L T V S S E F D G V R I K K E Y K F K I I Q -V L L (60)
M+ A ++E + + + + F I
AcrIF15 M T --T I T I A Y E V S N D K V E T I K T M V E --S -Q Q --I -H N V N F N G E E F T I E R G D F T S I D K -D E
MGV-GENOME-0199241_CDS_0002 E M R R E L A E E L E K -L G V -T E -E V E Y D (85)
+ L+ Y
AcrIF15 A E H V K L L N K ---I -Q D I -I H -G -Y S
MGV-GENOME-0199241_CDS_0002 3 AcrIC3 0.83 View Alignment MGV-GENOME-0199241_CDS_0002 M N F R E ----------T K E A N R L I -------N R I E K L D S F T M D I Q N ---P A R T L T V S S -E F (60)
M+ E+ ++ ++K D
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A L T G
MGV-GENOME-0199241_CDS_0002 D G V R I K K E Y K F K I I Q V -L L -E -M -R -R -E L A E E L E K L G V T -E E V E Y D (107)
+ + ++ + EL+ ++ +
AcrIC3 R D L E A A N A L F S E L A A -S V -E -A -T -N -E -M Y R E L D A E R A Q I N K A L E G
MGV-GENOME-0199241_CDS_0002 4 AcrIE1 0.82 View Alignment MGV-GENOME-0199241_CDS_0002 M N ---F R ---E T K -------E A N -R -L -I -N R -I E K L D S ---F T -M D I Q N P A R T L T -V -S (60)
M ++ + L ++ A L
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S -L -E E -A A S I L S L I V F Q -A E T L S D Q A N E L A N -Y -
MGV-GENOME-0199241_CDS_0002 S -E F D G V R I K K E Y K F K I I Q V L L E M R R E L A E E L E K L G V T -E E -V -E -Y -D (109)
G+ E + I + E+ E+ G+ + + D
AcrIE1 I R -R Q G L E -E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0199241_CDS_0002 5 AcrIC4 0.82 View Alignment MGV-GENOME-0199241_CDS_0002 M N F R E -T K -E A N R L I N R I E K L D S F T M D I Q N P A R T L T V S S -E -F D G V R I K K E Y K -F -K I I Q (60)
M + + ++ + + V +
AcrIC4 M D N K I T P -A D E E K I R E W L -N ------C -----E E A -S V D N -D -G D V W V -A -V -P -M ----
MGV-GENOME-0199241_CDS_0002 V L L E M R R E L -A -E -E -L E -K -L G V T E E V E Y -D (92)
E + +
AcrIC4 T G H W L S D E Q K -A -K -Y I -E -W -R --G --D -E T
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;