3D Structure for MGV-GENOME-0197869_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.21 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0197869_CDS_0009 1 AcrIE1 0.73 View Alignment MGV-GENOME-0197869_CDS_0009 M K R --P ----N K E E -Y E N -M L -------G ----D -E K F I A Y T K S L E D Y C E Y L E K N N R -E -(60)
M + + +L D L R
AcrIE1 M E K K L S D A Q V A L V A A W R -K Y P D L R E S L E E A A S I -L S L I V F Q A E T L S D Q A N E L A N Y I R R -Q
MGV-GENOME-0197869_CDS_0009 L S N G L D N A C E K L E A L R A C I D I L T D K E T K -Q D K E Y W -K -K K V -M K D V D (107)
++ AC +++ RA + + +DVD
AcrIE1 G L E E A E G A C R N I D I M R A K W V E V C G E V N -Q -H G I R V Y -G D A -I D R D V D
MGV-GENOME-0197869_CDS_0009 2 AcrIC3 0.59 View Alignment MGV-GENOME-0197869_CDS_0009 M K R P -N K E -E ---------Y E N M ---L -----G D ----E K F I A -Y T ----K S -L E -D Y C -(60)
M + +
AcrIC3 M S I Q V -T S T N G R T V N L E I E L G S V V A S S G Q V K F M A D K T D R G -L E S --R F L V P E A -G N R R I E
MGV-GENOME-0197869_CDS_0009 -E Y L E K N N -R E L S -N G L -D -N A -C -E -K -L -E A -L -R -A C I D I L T D K E T K Q D -K -E Y W K K (120)
+ R+ + + + + + +
AcrIC3 V A ---L T -G R D -L E -A A N -A -L F -S -E -L -A A -S -V -E ----A T N -E M Y R E -L -D -A E R A
MGV-GENOME-0197869_CDS_0009 K V M K D V -D (128)
+ K +
AcrIC3 Q I N K A L E G
MGV-GENOME-0197869_CDS_0009 3 AcrIE6 0.59 View Alignment MGV-GENOME-0197869_CDS_0009 M K R P N K E E Y E N M -L G -D E K F I A Y T K S L E D Y C E Y L E K ---N N -R E L S N G L D N A C E K L E A L R (60)
M E F + L D LE + D + L R
AcrIE6 M -N N D T E V L ---E -Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y T A V M V T Y D L I G K Q L A S R R
MGV-GENOME-0197869_CDS_0009 A C I D I L T D K E T K Q D K E Y W K K -K V M K D V -D (89)
A + + + K +
AcrIE6 A E L I E I L E E Q Y P G H A ---A D L -S I K N L C P
MGV-GENOME-0197869_CDS_0009 4 AcrIIA11 0.56 View Alignment MGV-GENOME-0197869_CDS_0009 M K R P N K E -E ------------Y E N M L ----------G ----D -E -K F -I A Y -T -K S L -E D (60)
M + + +
AcrIIA11 M A D M T L R Q F C E R Y R K G D F L A K D R E T Q I E A G W Y D W F C D D K A L -A -G R -L A K -I -W G I -L K G
MGV-GENOME-0197869_CDS_0009 --------Y C E -Y L -E -K -N N R E L S N -G L D N A C E ---K L E A L R A -C I D ---I L -T -D K -- (120)
N + E R D
AcrIIA11 I T S D Y I L D N Y R V -W F -K -N N C P M V G -P L -Y D D V R F E P L D E E Q R D E L Y -F G V --A -I D D K R
MGV-GENOME-0197869_CDS_0009 ----------------------------E ----T K ---------Q -----D --------- (180)
AcrIIA11 R E K K Y V I F T A R N D Y E N E C G F N N V R E V R Q F I N G W E -D E L K N E E F Y -K A R E K -K R Q E M E E A N
MGV-GENOME-0197869_CDS_0009 --K E Y W K K ----K -V -M K D V -D (202)
D
AcrIIA11 N K F A E I M Q R A D E -I -L W N L K E D
MGV-GENOME-0197869_CDS_0009 5 AcrIF23 0.55 View Alignment MGV-GENOME-0197869_CDS_0009 M K -R -P N K E -------E -------------------------------------Y E N M L -(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0197869_CDS_0009 ------------G D --E K F I -A Y T -K S L ---E D ----Y C E Y L E K N N R E L S N G L D N A ---- (120)
K + L +
AcrIF23 G R A L T G T A R Q K E W -A E -K I R A -E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I
MGV-GENOME-0197869_CDS_0009 C -E -K -L E A -L -R -A C I D I L -T -D K ----E T K Q D K E Y W K K K V M K D ---V -D (171)
+ A + +
AcrIF23 -A -G -F V M -Q -Q -K A L L A -Q H -R -S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;