3D Structure for MGV-GENOME-0196452_CDS_0048 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.81 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0196452_CDS_0048 1 AcrIE6 0.75 View Alignment MGV-GENOME-0196452_CDS_0048 M T -A K E Y V E D K V K S Y T R L A E R C K R E A E A S D -D I V V R A G Y S A R A N V W E M C A E E M D N V -R E M (60)
M+ E +E +K LA+ K + + + + + E
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E I
MGV-GENOME-0196452_CDS_0048 L Q E E ----P D Y R Q H R R -D -A (80)
L E + +
AcrIE6 L E E Q Y P G H A A D L S -I K N L C P
MGV-GENOME-0196452_CDS_0048 2 AcrIE1 0.65 View Alignment MGV-GENOME-0196452_CDS_0048 M -T ----A K E Y V E -------D -K V ----------K ----S -Y -T R -L -A -E ----R C K R E (60)
M A +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P -D L R E S L E E A A S I L S L I V F -Q -A -E T -L -S -D Q A N E L A N Y
MGV-GENOME-0196452_CDS_0048 A E A -S D D -I V V R A G Y S A R A N V W E M C A E E M D N V -R E M L Q E -E P D Y --R Q H -R -R -D -A (117)
+ + G + + E D
AcrIE1 I R -R Q -G L -E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R -V Y -G D --A I -D -R D V D
MGV-GENOME-0196452_CDS_0048 3 AcrIIC4 0.60 View Alignment MGV-GENOME-0196452_CDS_0048 M -T A K E Y V E -----D -------K V --------K S Y T R L A E R C K R -E A E A S ---D -D I V V R (60)
M + K + A +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L -P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E -N --Y -S
MGV-GENOME-0196452_CDS_0048 -A G Y S A R A N -V W -E M C A E E M D N V R E M L Q E E P D Y R -Q H R R D A (101)
+E + + L
AcrIIC4 K E L A E K F N K E -A V N E A V E K L Q K A I D -L -----A -E K Q G I Q F
MGV-GENOME-0196452_CDS_0048 4 AcrIF2-IC2 0.60 View Alignment MGV-GENOME-0196452_CDS_0048 M -T -A K E Y V ---E -D -K V -K S Y T -------R L A E ------R C K R E A E --A -S D -D I V V R A (60)
M T + + + D +++
AcrIF2-IC2 M A T K T A Q M I A Q Q H K -D -T V A A C -E A A E A I A I A K D Q V W D G E G -Y T K Y -T F -D -D N S V L I Q S
MGV-GENOME-0196452_CDS_0048 G Y S A ---R A N V W E M C A E E M D -N V -R -E M L Q E E ----P -D Y R Q H R R D A (107)
+ + + + +
AcrIF2-IC2 -G T T Q Y A M D A D D A D S I K G Y A D -W L -D D E A R S A E A S E I E R L L E S V E E E
MGV-GENOME-0196452_CDS_0048 5 AcrIF23 0.58 View Alignment MGV-GENOME-0196452_CDS_0048 M T -A K E Y V ---E ---D ----K --V K S Y T --------------------------------(60)
MT + + + +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T --G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T
MGV-GENOME-0196452_CDS_0048 ----------R --------L A E -R C K R E A E A -S -D -D I V V R A G Y S A R A N V W E M C A E ---- (120)
+ + G A W
AcrIF23 F G G R A L T G T A -R Q K E W A E K I R -A E K V Q Q M N -Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q
MGV-GENOME-0196452_CDS_0048 E M -D -N V R E M -L Q E ---------E -------P ----D Y -R Q H R R -D --A (169)
E
AcrIF23 E -I -A G F V M -Q Q K -A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L -T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;