3D Structure for MGV-GENOME-0195587_CDS_0009 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 96.60 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0195587_CDS_0009 1 AcrIE6 0.76 View Alignment MGV-GENOME-0195587_CDS_0009 M L E D ---K I A Q L E H A K K ----C Y L R D L E S E H M ---A V -V Q R D ---F -G L Q V A S K R R D W L K (60)
M + Q +A L + + RR L
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0195587_CDS_0009 K Q V K R C D E -E -I -K F L E -E -R R C Q (84)
+ L C
AcrIE6 E I L E E Q Y P G -H -A A D L S I -K N L C P
MGV-GENOME-0195587_CDS_0009 2 AcrIE1 0.65 View Alignment MGV-GENOME-0195587_CDS_0009 M L ---E -D ---K I A ----Q ---L -E ----H -------A -K K C Y L R -D L E ----S E H M A V -(60)
M D ++ + + L +
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D -L -R E S L E E A A S I L S L I -V F Q A E T -L S D Q A N E L A N Y I R
MGV-GENOME-0195587_CDS_0009 V Q R D F G L Q V A S K R R D W L K K Q V K R C D E ----E I K F L -E E R ---R C -Q (106)
Q + A + D + + +
AcrIE1 R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D -V D
MGV-GENOME-0195587_CDS_0009 3 AcrIIC4 0.63 View Alignment MGV-GENOME-0195587_CDS_0009 M L -E -D K I A Q L ------------E H ----A K K ----C Y L R D L E S E H M A V V Q R D F G L Q V A S (60)
M A++ + K + S + + +A
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L A E
MGV-GENOME-0195587_CDS_0009 K R R D -W L -K -K Q -V K R C D E E I K F L E E R R C -Q (91)
K + V + I +E
AcrIIC4 K F N K E -A V -N E -A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0195587_CDS_0009 4 AcrIF23 0.59 View Alignment MGV-GENOME-0195587_CDS_0009 M -L -E D K I A ---Q L E ---------H ----A K ----K ------------------------(60)
M +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A --Y D P S -Y N Y A A N T R R A S L S P R G I D A R A V A K
MGV-GENOME-0195587_CDS_0009 ----------------------C -Y -L R D L E --------S -------E H -M -A V -V Q R D F (120)
+ +R
AcrIF23 T F G G R A L T G T A R Q K E W A E K I R A -E -K V Q Q M -N Q D Q A E M A C D P S G L L T A A K -F W -I E N R N D
MGV-GENOME-0195587_CDS_0009 ---G L Q V A S K R R D W L K -------K -----Q V K R C D E E I K F L E E R R C Q (167)
+ L V + E L R
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0195587_CDS_0009 5 AcrIC3 0.54 View Alignment MGV-GENOME-0195587_CDS_0009 M L E D K I ---A ---Q L E ----H ----A K -K ----C Y L R D L E --------S E --H -M -----(60)
M +LE + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G -S V V A S -S -G Q V K F M A D K T D R G L E S R F L V P E A G N R R I E V A
MGV-GENOME-0195587_CDS_0009 ----A V V Q R D F G L Q V A S K R R D W L K K Q V K R C D E E I K F L E E R R C Q (103)
+ + + + + D E +
AcrIC3 L T G R D L E A A N A L F S E L A A S V E A T N E M Y R E L D A E R A Q I N K A L E G
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;