3D Structure for MGV-GENOME-0193440_CDS_0037 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.98 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0193440_CDS_0037 1 AcrIE6 0.72 View Alignment MGV-GENOME-0193440_CDS_0037 M N -E E K I L T F A L R E A L N V W S K C K D R A D S I P D ----N ----K I ----A A Y K E Q K A W N D -V L (60)
MN + +L ++ + KDR+ ++ + + + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M -Y T A V M V T Y D L I G K Q L A S R R A E L I E
MGV-GENOME-0193440_CDS_0037 F -L K -K M -L -I S I ---T -A --E -K (84)
L +
AcrIE6 -I L -E E -Q -Y P G H A A D L S I K N L C P
MGV-GENOME-0193440_CDS_0037 2 AcrIIC4 0.60 View Alignment MGV-GENOME-0193440_CDS_0037 M N -E E K I L T ------F -----------------A -L -R E A L N V W S K C K D R A D S I P -D N -K (60)
M + A+ +S +D + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G -L -F K S A V E Q F S S A R D F F K N E -N Y S K E
MGV-GENOME-0193440_CDS_0037 I A A Y K E Q -K A W N D V L F L K K M L I S I -T --A -E K (92)
+A + V L K + +
AcrIIC4 L A E K F N K E A V N E A V E K L Q K A I D -L A E K Q G I Q F
MGV-GENOME-0193440_CDS_0037 3 AcrIE1 0.59 View Alignment MGV-GENOME-0193440_CDS_0037 M -N ----E E K I -L -T -F ----------A L ----R --------E -A -L N -V -W S -K C K D R A (60)
M L S +
AcrIE1 M E K K L S D A Q V -A -L -V A A W R K Y P D L R E S L E E A A -S I L S L I V F -Q -A -E T -L -S D -Q A N E L
MGV-GENOME-0193440_CDS_0037 D S I P -D N -----K I A A Y K E Q K A W N D V L F L K K ----M -L I S I T A ----E --K (111)
+ + A + + I +
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I D R D V D
MGV-GENOME-0193440_CDS_0037 4 AcrIF23 0.56 View Alignment MGV-GENOME-0193440_CDS_0037 M N -E E K I L T ---------F -----A L ----------R -----------------------(60)
M+ L
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y -A A N T R R A S L S P R G I D A R A V A K T F
MGV-GENOME-0193440_CDS_0037 --------------------------------------E A L N V W S K C K D R A D S I P D N -K I (120)
+L++ +
AcrIF23 G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R N D S A Q E I A G
MGV-GENOME-0193440_CDS_0037 A A Y K E -Q ------------K -A W N D V L F L K K M L I S I T A -E --K (163)
+ V+ + +T
AcrIF23 F V M Q -Q K A L L A Q H R S A K A A -G Q A D K V A K I A A E Y N A L T -A R W G F
MGV-GENOME-0193440_CDS_0037 5 AcrIIA28 0.52 View Alignment MGV-GENOME-0193440_CDS_0037 M N ------E E K I L -T -F ----A -L -R E A L N V W S K C K D R ----A D S I -P -D ---N ------(60)
M L +E+ N + A I
AcrIIA28 M K T I F T K K Q T E E L L -N D I S I E -K -Q K E L F N S M H D F R S Q H A K E A -R I P -G W S D K Y N K L E K K
MGV-GENOME-0193440_CDS_0037 -----K -I A -A -Y K E -Q K -A W N D V L F L K K M -L I S I T A -E K (100)
+ K + + L + +
AcrIIA28 M L S D F E E -V T -G I K -Y D -T L E S -E L I W D N -L -S N K F L Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;