3D Structure for MGV-GENOME-0191943_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 93.55 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0191943_CDS_0008 1 AcrIE6 0.74 View Alignment MGV-GENOME-0191943_CDS_0008 M S N E K D Y L I S L L M K N K A Q L K M L D F I F E N N S N ------A D E E K M N A I L D E K L R V E K N I G -N (60)
M+N+ + L + + + + L + A +I + +
AcrIE6 M N N D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I E -
MGV-GENOME-0191943_CDS_0008 -I -E -K -A -L -K ---E L E --K -Q -K (85)
K
AcrIE6 I -L -E -E -Q -Y P G H A A D L S I K N L C P
MGV-GENOME-0191943_CDS_0008 2 AcrIIC4 0.62 View Alignment MGV-GENOME-0191943_CDS_0008 M S -N --E K D Y ------------L I -S --------L -L -M K N K A Q L K M L D F I F E N N S -N A D (60)
M + L Q + F N
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K -N H R E P I K G -L -F K S A V E Q F S S A R D F F K N E -N -Y S
MGV-GENOME-0191943_CDS_0008 E E K M N -A I L -D E K L R V -E K N I G N I E K A L K E L E ---K Q K (98)
E + + + KA+ +E Q
AcrIIC4 K E L A E K -F N K E ---A -V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0191943_CDS_0008 3 AcrIE1 0.60 View Alignment MGV-GENOME-0191943_CDS_0008 M S ---N -E K D Y L I S -----------------L L -----M -K N K A -Q L K -M -L D -F I F E N -(60)
M + L+ + + L + + N
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L I V -F -Q A E T -L S D -Q A -N E L A -N Y
MGV-GENOME-0191943_CDS_0008 N S N A D E E ---K -M N A I -L D -E K -L R V E K N I G -N I E -K A L ----K -E -L -E -K -Q -K (116)
E D ++ +
AcrIE1 I R R Q G L E E A E G A C -R N I -D I -M R A K W V E V C -G E V -N Q H G I R V Y -G -D -A -I D R D V D
MGV-GENOME-0191943_CDS_0008 4 AcrIF23 0.55 View Alignment MGV-GENOME-0191943_CDS_0008 M S N E ---K D -Y ---L I --------S ----------------L L -----------------(60)
M+N
AcrIF23 M T N F Q T W L -D S A D I P -V Q Q N G Q W I -D L E T G I A Y D P S Y N Y A A N -T R R A S L S P R G I D A R A V A
MGV-GENOME-0191943_CDS_0008 ------------------------------------M K -N K A Q -L -K -M L D -F I F E N N S N (120)
+ F E N N
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D -P S G L -L -T A A -K F W I E -N R N
MGV-GENOME-0191943_CDS_0008 A D E E K M N A I L D E K L ----R V -E ---------K N I G N I E K A L K E L E K -Q -K (170)
+ + I L
AcrIF23 D S A Q E I A G F V M Q Q K A L L A -Q H -R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0191943_CDS_0008 5 AcrIIA28 0.53 View Alignment MGV-GENOME-0191943_CDS_0008 M S -----N E K D Y L I -S L ----L M K N K A Q L K M L D F I F E N N S N -------A D E E K M N A I L D E (60)
M + L+ + + + L +
AcrIIA28 M K T I F T K K Q T E E L L N D I S I E K Q K E L F N S M H D F R S Q H A K E A -R I P G W S D K Y N K L E K K M L S D
MGV-GENOME-0191943_CDS_0008 K L R -V -E K N I G N I E ------K A L K E L E -K -Q K (92)
++E L +
AcrIIA28 F E E V -T G I K Y D T L E S E L I W D N -L S N K F L -Y N S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;