3D Structure for MGV-GENOME-0184139_CDS_0040 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 89.35 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0184139_CDS_0040 1 AcrVIA2 0.77 View Alignment MGV-GENOME-0184139_CDS_0040 M K M W K C K K C G G T D F K V E I D G -Y I E L D -L K K N G D F D Y K K D -T -L N V R N I H P Y I H C C K C G N E (60)
M CKKCG F +I G E+ K G+ C KC N
AcrVIA2 M W -K -C K K C G C D R F Y Q D I T G G I S E V L E M D K D G E V L D ---E -I -D D -V E Y G D F S C A K C D N S
MGV-GENOME-0184139_CDS_0040 D E E T E I S K I A D W E E ------E D --E -R D (88)
+ IA W+E
AcrVIA2 S S K I --Q E I A Y W D E I N G K N K T Y L S K D -K
MGV-GENOME-0184139_CDS_0040 2 AcrIF18 0.49 View Alignment MGV-GENOME-0184139_CDS_0040 M K M W K C K K C G G T D -F K V E I -D G Y I -E L D L K K N G D F D Y K K D -T L -N V R N -I H -P -Y I H C C K (60)
M K + T V
AcrIF18 M T T I K A A Y I S K D Q N W N D --G -T T -T -Y W F D V ------N -G E T -F G V V H G G E S W N A K V V D C
MGV-GENOME-0184139_CDS_0040 C G N E D E E T E I S K I A D W E E -E D E R D (84)
G + + E +
AcrIF18 D G A P S D Q Y T V D Q F -N I T E D M -I A E
MGV-GENOME-0184139_CDS_0040 3 AcrIC4 0.48 View Alignment MGV-GENOME-0184139_CDS_0040 M K M W K C K K C G ---G T D F K V E I D G Y I E -L D L K K N G D F D -Y K K D T L N V R N I H P Y I H C C K C G N (60)
M + D + G
AcrIC4 M D N K I T P A D E E K I R E W L --N --C E E -A -S V ------D N -D --------G D V W V A V P M T G H
MGV-GENOME-0184139_CDS_0040 E D E E T E I S K I A D W E E E D E R D (80)
+ K ++W D
AcrIC4 W L S D E Q K A K Y I E W R G -D -E T
MGV-GENOME-0184139_CDS_0040 4 AcrIIA4 0.46 View Alignment MGV-GENOME-0184139_CDS_0040 M K M W K C K -K C G G T D F K V E I D G Y I E L D L K K N G D F D Y K K D T L N V R N I H P -Y I H -C C K C G N E D (60)
M D V + G + +I I GNE
AcrIIA4 M N I N D L I R E I K N K D Y T V K L S G T -------D --------S ---N S I T Q L I I -R V N N D G N E Y
MGV-GENOME-0184139_CDS_0040 E -E -----T E I -----S K I A D -W -----------E ---E -E --D -E R D (108)
+ S E
AcrIIA4 V I S E S E N E S I -V E K F I S A F K -N G W N Q E Y E D E E E F Y N D M Q T I T L K S E L N
MGV-GENOME-0184139_CDS_0040 5 AcrIB6 0.46 View Alignment MGV-GENOME-0184139_CDS_0040 M K -M -W K C K -----K C -G --------G -----T D F K V E I D G --Y I E L D L K K N G D -F --D Y (60)
M W + + +
AcrIB6 M G K T Y W Y -N E G T D T L -L T E K E Y K E L M -E R E A K A L Y E E V Q E E E K --D F E S S E -K -T -S F --
MGV-GENOME-0184139_CDS_0040 -K K D --T L -N V R N I H P Y I H C C K C G N E D E E T E I S K I A D W E E E D E R D (105)
N + ++ E
AcrIB6 E E F -L K --T C Y E N E S D F V L S --------D N ----E ---G N K L E E W
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;