3D Structure for MGV-GENOME-0182123_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold with pLDDT = 94.72 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue. A higher value indicates better prediction accuracy. More detail please see: Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0182123_CDS_0001 1 AcrIE6 0.85 View Alignment MGV-GENOME-0182123_CDS_0001 R D E L I N D I A D I K R K A E V F D E I K E Y T L D K I E T L T T R Q E F A S ----N S N E F E Y F G N L ----L (60)
D + + + L T + G
AcrIE6 M N N ---D T E V L E ---Q Q I K A F E L L A D E L K D R L P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R R
MGV-GENOME-0182123_CDS_0001 T A F K A I K Y K I S -D L -E -R --G --S -D E (87)
I +
AcrIE6 A E L I E I L E E Q Y P G -H -A A D L S I K N L C P
MGV-GENOME-0182123_CDS_0001 2 AcrIIA19 0.84 View Alignment MGV-GENOME-0182123_CDS_0001 R D E L I N D -------I ----A -D -I -------------------K -R K -A -----------(60)
++ +
AcrIIA19 M K L I V E V E E T N Y K N L V N Y T -K -L -T N E S H N I L V N R L I S E Y I T K P Y E -L R L D L S E R Y S N R D
MGV-GENOME-0182123_CDS_0001 -E -V -F -D -E I K E ---Y T L D K I E T L T T R Q E F A S ---------N -S N E F E -Y F G N L L T A F K (120)
+ E L I L + E + FE +
AcrIIA19 L I E -F -K -F M L I E Y C K E A L Q D I K E L A N S D E A Y E T D E A F E A V F -R -Q L F E E -V I S N P D T V L
MGV-GENOME-0182123_CDS_0001 A I K Y K I S D L E R G S D E (135)
+ + +
AcrIIA19 K A F H S Y T S F L E E N -K
MGV-GENOME-0182123_CDS_0001 3 AcrIE1 0.84 View Alignment MGV-GENOME-0182123_CDS_0001 R D -E L I N D ---I ----A -D -I --------K -R -K -A ---E V F D E I K E Y T L D K I E T L T T R Q (60)
+ L + A + E D + L +
AcrIE1 M E K K L S D A Q V A L V A A W -R -K -Y P D L R E S L -E -E -A A S I L S L I V F Q A E T L S D Q A N E L A N Y I
MGV-GENOME-0182123_CDS_0001 E F A S -N -S -N ----E F E Y F G N L L T A F K A I K Y K I S D L -----E ----R -G -S D E (113)
+ + ++ +
AcrIE1 R R Q -G -L -E -E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I R V Y G D A I -D -R D V D
MGV-GENOME-0182123_CDS_0001 4 AcrIIA34 0.83 View Alignment MGV-GENOME-0182123_CDS_0001 R D E L ---I N D -I ---A D I ---------------------K --------R -K -A -E -V F -D (60)
+ I D
AcrIIA34 M K N I A N E I K T I R Y A F E D G R S T Q K S I M R K I K A L T D Q F E T M -D D L I D S L N -S -Y -A -D T -H -
MGV-GENOME-0182123_CDS_0001 -E -I K E ----Y T L D K I E T L T -T ---R Q -E ---F A S -----N -S -N E F E Y F G -N L L T A F K A (120)
+ I + + + + + + F A
AcrIIA34 Y -T W A -I T Y F Q L A R I I I S F Q A S N N T T S E -K K I D L -Q S G P I E V -N G K L K I R -V -T V D E F M A
MGV-GENOME-0182123_CDS_0001 I K ------Y K I -S D L E R G S D E (141)
L +
AcrIIA34 D L A N W E H L E D -I K K L A K E L -A
MGV-GENOME-0182123_CDS_0001 5 AcrIF15 0.83 View Alignment MGV-GENOME-0182123_CDS_0001 R D E L I N D -I A D I K R -K A E V F D E I -K E Y T L -D K I -E -T L T -T --------R Q E -F A S N -S N (60)
I+ + + I + E F
AcrIF15 M T -T I T I A Y -E ---V --------S -N D K V E -T I K -T -M V E S Q Q I H N V N F N G E E F T I -E R G
MGV-GENOME-0182123_CDS_0001 E F E Y F G N L L T A F K A -I -K -Y -K -I S D L E R G S D E (93)
+F +D+ +G
AcrIF15 D F T S I D K D E A E H V K L -L -N -K -I -Q D I I H G Y -S
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;