3D Structure for MGV-GENOME-0181833_CDS_0038 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 86.89 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0181833_CDS_0038 1 AcrIE6 0.73 View Alignment MGV-GENOME-0181833_CDS_0038 M E Y S K Q I V I D G L K R T I E Q -T E A R I V E L S E P --C V K S L A F S R S E E R D L L K K Q V K G W K K R -I (60)
M + V++ + E + L + DL+ KQ+ + I
AcrIE6 M N N -D T E V L E Q Q I K A F E L L A D E L K D R L P T L E I -L S P M Y T A V M V T Y D L I G K Q L A S R R A E L I
MGV-GENOME-0181833_CDS_0038 K E L -------E -D ------E -T (82)
L
AcrIE6 E I L E E Q Y P G H -A A D L S I K N L C P
MGV-GENOME-0181833_CDS_0038 2 AcrIIC4 0.59 View Alignment MGV-GENOME-0181833_CDS_0038 M E Y ---S K Q -------------I -------V I D G L K R T I E -Q T E A -R I V E L S E P C V --K S (60)
M + + I GL +++ +
AcrIIC4 M K I T S S N -F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E -Q F S S A R D F F K N E N Y S K E L
MGV-GENOME-0181833_CDS_0038 L A F S R S -E E R -D -L L -K K Q V K G W K K R I K E L E D ---E T (97)
+ + V K I +E
AcrIIC4 A E ----K -F N K -E A -V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0181833_CDS_0038 3 AcrIF23 0.59 View Alignment MGV-GENOME-0181833_CDS_0038 M E Y --S -K -Q -I --V ----I D G L K ------------------------------------(60)
M + +
AcrIF23 M T N F Q T W -L -D S A D I P V Q Q ---N -G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A
MGV-GENOME-0181833_CDS_0038 ------------------------R T I -E ----Q T E A R I V E L S E P C V ---K S ----L A F S (120)
Q A + + K
AcrIF23 V A K T F G G R A L T G T A R Q K E W A E K I R A E K V -Q Q M N Q D Q A E M A C D P S G L L T A A K F W I E N R -N D
MGV-GENOME-0181833_CDS_0038 R S -------E E R D L L K K ------------Q V K G W K K R I K E L E D E --T (167)
+L V L
AcrIF23 S A Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0181833_CDS_0038 4 AcrIE1 0.58 View Alignment MGV-GENOME-0181833_CDS_0038 M E Y ---S K Q I V I -D ----------------G -L K R -T -I -E -Q T E A -R I V -E L S E P C V K S (60)
ME Q+++ + +
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E S L E E A A S I -L S L -I -V -F -Q A E T L -S D -Q A N E L A N Y
MGV-GENOME-0181833_CDS_0038 L A F S R S E E R D L L K K Q V K G W K K R I K E L E D ---------------E --T (107)
+ + EE + + +++ + + E+
AcrIE1 I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q H G I R V Y G D A I D R D V D
MGV-GENOME-0181833_CDS_0038 5 AcrIF2-IC2 0.52 View Alignment MGV-GENOME-0181833_CDS_0038 M -E Y S K Q I V -I D G L K R T -I E ---Q T ---E -A -R I V ------------E L -S E ------P C (60)
M + Q + ++ + +
AcrIF2-IC2 M A T K T A Q M -I A Q -Q H K D T V A A C E A A E A I -A -I A K D Q V W D G E G Y T K Y T F -D -D N S V L I Q S -
MGV-GENOME-0181833_CDS_0038 -V -K S ---------L A -F S -R S -E E R -D L L K K Q V -K -G W K K R I K E L E D E T (110)
+ + D ++ + + +E+
AcrIF2-IC2 G -T T Q Y A M D A D D A D S I K -G Y A -D -W L D D E A R S A E A -S E I E R L L E S V E E -E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;