3D Structure for MGV-GENOME-0166675_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 92.32 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0166675_CDS_0006 1 AcrIE1 0.71 View Alignment MGV-GENOME-0166675_CDS_0006 M K -V ---T Y E E ---F ----N E L -Q T --------Q Q K I R D Y A Q E A F N I L I C L N Q I I E E K --(60)
M +L + I A + + L + I
AcrIE1 M E K K L S D A Q V A L V A A W R K Y P D L R E -S L E E A A S I L S L I V F Q A E T L S D Q A N E L A N Y I R R Q G L
MGV-GENOME-0166675_CDS_0006 -----H N K Q I I K M T N E I K D -I E N E -A V E -N I -----R K M -I E G --I (106)
++I M + + I+
AcrIE1 E E A E G A C R N I D I M R A K W V -E V C G -E V N -Q H -G I R V Y G D -A I D R D V D
MGV-GENOME-0166675_CDS_0006 2 AcrIE6 0.63 View Alignment MGV-GENOME-0166675_CDS_0006 M K V T Y E E F N -E L Q T Q Q K I R D Y A Q E A F N I L I C L N Q I I E E --K -------H N K Q I I K M T N E I (60)
M Q I+ A + L +E I K
AcrIE6 M N N -D --T E V ---L E Q Q I K A F E L L A D E L K D R L -P T L E I L S P M Y T A V M V T Y D L I G K Q L A S R
MGV-GENOME-0166675_CDS_0006 K D I E N E A V E -N -I ----R K M -I -E -G --I (89)
+ E++E
AcrIE6 R A E L I E I L E E -Q -Y P G H A A D L S I -K N L C P
MGV-GENOME-0166675_CDS_0006 3 AcrIIC4 0.58 View Alignment MGV-GENOME-0166675_CDS_0006 M K V T Y E E F N E L Q T ---------Q -Q ----K I R D Y A Q E A F N I L I C L N Q I I E -E ----K -H -(60)
MK+T F + T I+ A + E
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q F S S A R D F F K N E N Y S K E L -A
MGV-GENOME-0166675_CDS_0006 N K Q I I K M T N E I K D I E N E A V E N I R K M -I -E -G I (92)
K NE+ + + A++ + K
AcrIIC4 E K F N K E A V N E A V E K L Q K A I D L A E K -Q -G -I Q F
MGV-GENOME-0166675_CDS_0006 4 AcrIC3 0.58 View Alignment MGV-GENOME-0166675_CDS_0006 M K -V T Y E E ----------F N E L Q -T --------Q Q K I ----R -D ---Y A ----Q ------(60)
M + K + +
AcrIC3 M S I Q V T S T N G R T V N L E I E L G S V V A -S S G Q V K F M A D K T D R G L -E -S R F L V P E A G N R R I E V A
MGV-GENOME-0166675_CDS_0006 E A F N I L I C L N Q I I E E -K H N K Q I I K M T N E I K D I E N E A V E N I R K M I E G I (107)
L +N + ++ + E +I K +E
AcrIC3 L T G R D L E A A N A L F S -E -L A A S V E A T N -E M Y R E L D A E R A Q I N K A L E -G
MGV-GENOME-0166675_CDS_0006 5 AcrIF23 0.54 View Alignment MGV-GENOME-0166675_CDS_0006 M K V T Y E E ---F N -E L Q -T ------------------------------------------(60)
M +Q +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N T R R A S L S P R G I D A R A V A K T F G
MGV-GENOME-0166675_CDS_0006 ----------Q Q ----K --------I ----R -D -Y -A -Q E A F N I -L I -C L N Q I I E E ---K (120)
K + L + IE
AcrIF23 G R A L T G T A R Q K -E W A E K I R A E K V Q Q M N Q D Q -A -E -M -A C D P S G -L L -T A A K F W I E N R N D S
MGV-GENOME-0166675_CDS_0006 ------H N K Q I I K M T N E ----I -K D ----I -E N E A V E N I R K M I E G --I (168)
Q ++
AcrIF23 A Q E I A G F V M Q Q K A L L A Q H R S A -K A A G Q A D -K V A K I A A E Y N A L T A R W G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;