3D Structure for MGV-GENOME-0157582_CDS_0027 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 83.15 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0157582_CDS_0027 1 AcrIIA8 0.83 View Alignment MGV-GENOME-0157582_CDS_0027 M R A G L L T E K I L I Y R T D L I Q G E D G A T N N I H T F I T S T K A Q V D S K A G D R T I V N D -E V I Y P F R V (60)
M + + + ++ G GA + + + ++
AcrIIA8 M S I F T D M I P A E L L I N E Y K K G Q S G A K H D N Y V S V G R I M V A I Y K N N S F K N -T G -T V K Y Q D S T H
MGV-GENOME-0157582_CDS_0027 T F T V W R Y V D I K E Y T D N I M W D N T K Y R V L S V M E D K A N N R K I I E T E K V N --E (109)
+ V I I D+++Y V + ++
AcrIIA8 S G I T M S K V F I D G K E Y R I D I D T Q H Y E V Q D F D T S -G -R Q T T L I L K R I D L Y G
MGV-GENOME-0157582_CDS_0027 2 AcrVIA3 0.45 View Alignment MGV-GENOME-0157582_CDS_0027 M R A G -L L -----T -E K I L -I Y R T D L I Q G E D G A T N N I H T F I T S T K A Q V D S K A G D R -T -I V N (60)
M L + + G ++ I+ + V +
AcrVIA3 M F -K E F L E K C L R Y G -N L Y I -L E E ---T ---G D R K K V K -R I S K R H G K V ---T E A S V -L L F D
MGV-GENOME-0157582_CDS_0027 D E V I Y P F R V T F T V W R -Y V D I K E Y T D N I M W D N T K Y R V L S V M E D K A N N -R K I I E T E K V N E (118)
T+ + + I D + + EK
AcrVIA3 S ----G -T K R T T I N -E -I Y L N S Q G Y F I I R D --------------Q -K --R L K L E K F -K
MGV-GENOME-0157582_CDS_0027 3 AcrIIA22 0.42 View Alignment MGV-GENOME-0157582_CDS_0027 M R A G L L T E K I L I Y R T D L I Q G E D G A T N N I H T F I T S T K A Q V D S K A G D R T I V N D E V I Y P F R V T (60)
M + + + V
AcrIIA22 M V V E E T R D ---L A E -T -----A ------D -------C V --------------V -------
MGV-GENOME-0157582_CDS_0027 F T V W R Y V D I K E Y T -D -N -I -M -W D N T K Y R -V -L S V M E D K A N N R K I -I E T E -K V N E (115)
D +YR D +
AcrIIA22 -----------I -E -A -I -L -V D D G L R Y R Q -L S V G I K D E N G D I I R I V P I S T V -L I
MGV-GENOME-0157582_CDS_0027 4 AcrIB3 0.41 View Alignment MGV-GENOME-0157582_CDS_0027 M R A G --L -L T E K ------------------------------------------------(60)
M+A E
AcrIB3 M K A I K L N V Y L E T A N F R N P M S F Q S K E S Y P L P P F S T V I G M V H V A C G F K S Y H A M D V S V A G N S F
MGV-GENOME-0157582_CDS_0027 ------I ---L I Y -R -----T ----D L -I Q G ---E ----D G -A T N N I H T F I T S T K A Q V D S (120)
+ + + + IT
AcrIB3 S T V H D L A S R Y E F -N P T T K Y E S A R H Q M K V Y S P Q K D K M I G I T -Q G -I S H I H L I T D -------
MGV-GENOME-0157582_CDS_0027 K A G D R T I V N D E V I Y -P F R V -T F T V W -R --Y ----V ---D I K E Y T D N I M W D N T K Y R V L S V M (180)
++ + ++ + V
AcrIB3 --------------L --H L Q L H I I P E D Q S E V Y F I E S K L K N P S Q F L S L G R H E D V M M I K D V K
MGV-GENOME-0157582_CDS_0027 E D K --------------------------------A -----------------------N (240)
AcrIB3 V I D V Q E E T L P S N R E L T K A T Y V P V S Y K I G G A F F R L N K N Y E L V E Q K K K W Y R K F S K Q E V L Y A G
MGV-GENOME-0157582_CDS_0027 N R -K -------I I E T E -K --V -N -E (265)
+I + V
AcrIB3 E -G -T I I P K D S L I W V D E D G E V L F P V
MGV-GENOME-0157582_CDS_0027 5 AcrIF8 0.41 View Alignment MGV-GENOME-0157582_CDS_0027 M R A G L L T E K I L I Y R T D L I Q G E D G A T N N -I H T F -I T S -T K -A Q V D S K A G D R T I -V N D E V I Y (60)
M ++ + + + A V N
AcrIF8 M A -R I A P N E ---------D ---S T -M S T A Y I I F N S -S V -A A -V V D T E ---I -A -N -----
MGV-GENOME-0157582_CDS_0027 -P F R V ---T F T V W R Y V D I -K -E --Y T D N I M W --D N T K Y R V L S V M E ---D K -A -N N R K I I E (120)
V T TV N+ R+ R I
AcrIF8 G -A N V T F S T V T V K E E ---I -N -A N R D F N L V N A Q N G K I S R A K R W G N E A S K -C E Y F G R E I N P
MGV-GENOME-0157582_CDS_0027 T E K V N E (126)
TE
AcrIF8 T E F F I K
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;