3D Structure for MGV-GENOME-0156780_CDS_0001 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 88.61 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0156780_CDS_0001 1 AcrIE1 0.70 View Alignment MGV-GENOME-0156780_CDS_0001 V K E N S I E E D I K -N -A -E -H F -I K S I K T D -K E Y K E E N G W H G Y Y N K E I V E L A R I L Q H I L S H Y (60)
E + +
AcrIE1 M -E K K L S ----D -A -Q -V -A L -V ---A A W R K ---Y -------P D L R E -------------
MGV-GENOME-0156780_CDS_0001 K R -V -F -K -E -A -N R Y K N M Y K A E -H -E -I -H -L -V R N E Q L D R K -E -N A -V -T -K C N E L I I (120)
Q++ N +
AcrIE1 --S -L -E -E -A -A -S I -------L -S -L -I -V -F ----Q A E T L S -D -Q A -N -E L A N Y I R R
MGV-GENOME-0156780_CDS_0001 -E N A K L K E E -N E E L K Q -D R N N N -Y Q M I A L A Q N E M L G Y M Q G Y E -D G K K S K R S A V -A Y I V E N (180)
+ E + R G +
AcrIE1 Q -G L E E A E G A C R N I D -I M R A -K W ---------V -E V C G E V N Q H -G I R V Y ----G -D ----
MGV-GENOME-0156780_CDS_0001 Q Q Y Y I L N -K L N I I K N -I (197)
+
AcrIE1 -------A -I D R --D V D
MGV-GENOME-0156780_CDS_0001 2 AcrIIA11 0.59 View Alignment MGV-GENOME-0156780_CDS_0001 V K E N S I E E D -I -K -N -A -E H -F I K S --I -K T D K E Y K E E N G W H G Y Y ---N -K -E -I -V E L -(60)
+ + E K D+E E GW
AcrIIA11 M A D M T ----L -R -Q -F -C E -R Y R K G D F -L A K D R E T Q I E A G W Y D W F C D D -K -A -L -A G R -L
MGV-GENOME-0156780_CDS_0001 A R I L Q H I L S H Y --K R V F K E A N R Y K -N M Y K -A E -H E -I H L --V ---R N E -Q L D --------(120)
A+ + IL + N + E Q
AcrIIA11 A K -I W G I L K G I T S D Y I L D N Y R V W F K N N C -P -M V G -P L Y D D V R F E P L D E E Q -R D E L Y F G V A
MGV-GENOME-0156780_CDS_0001 ---R ----K -E ---N A V ----T -K C N E L I I E N A K L K E E N E E L K Q D R N N N Y Q M I A L A Q N E M (180)
K +A ++ + N E
AcrIIA11 I D D -K R R E K K Y V I F T A -R N D Y -E N E C G -F N N V R E V R Q F I N G W E D E L K N ----------E -
MGV-GENOME-0156780_CDS_0001 L G Y M -Q G Y E D G K K S K R S A V A Y I V E N Q Q Y Y I L N K L N I I K N I (220)
Y E + + + L +K
AcrIIA11 E F Y -K A -R E K K R Q E M E E -A N N K F A E I M Q R A D E I L W N L K E D
MGV-GENOME-0156780_CDS_0001 3 AcrIE6 0.58 View Alignment MGV-GENOME-0156780_CDS_0001 V K E N S I E E -D I K N A E H F I K S I K T D K E Y K E E N G W H G Y Y N K E I V E L A R I L Q H I L S H Y K R V F K (60)
N E +
AcrIE6 M -N N D T -E V -L E -------------Q --------------Q -------------------
MGV-GENOME-0156780_CDS_0001 E A N R Y K N M Y K A E H E -I -H -L -V -R -N -E -Q -L -D R K E N A V T K C -N -E L I I E N A K L K E E N E (120)
+ DR L
AcrIE6 -I K -----------A -F -E -L -L -A -D -E -L -K D R L -------P -T -L ----E I ---L --
MGV-GENOME-0156780_CDS_0001 E L K Q D R N N N Y Q M I A L A -Q N E M L G -Y M Q -G Y E D G K -K -S K R S A V A Y I V E N Q -Q Y Y I L N -K -(180)
+ + +R ++ I+E Q ++
AcrIE6 --S P M Y T A V ----M -V T ------Y -D L I -G K Q L -A -S -R R A E L I E I L E E Q Y P G H A A D L -S
MGV-GENOME-0156780_CDS_0001 L N I I -K N --I (190)
+ N
AcrIE6 I ---K -N L C P
MGV-GENOME-0156780_CDS_0001 4 AcrIC3 0.58 View Alignment MGV-GENOME-0156780_CDS_0001 V K E N -S I E E -D I K N A E H F I K S I K T D K E -Y K E E N G W H G Y Y N K E I V E -L A -R I L Q H I L S H Y K (60)
E G + + A
AcrIC3 M S -I Q V -T S T -N G -------R T V ---N L -E I E L G S V V A S S G Q V K F M -A D -K ---------
MGV-GENOME-0156780_CDS_0001 R V F K E A N R Y K N -M Y K A E H E I H L V R N E ---Q L D R K E N A V T K C N E L I I E N A K L K E E N E E L K Q (120)
LV + E +
AcrIC3 -T -------D R G ----L E S R F L V P E A G N R -R I E V A L --------------T G R D L E A A N A
MGV-GENOME-0156780_CDS_0001 D R N N -N Y Q M I A L A Q N E M L G Y M Q G Y -E -D G K K S K R S A V A Y I V E N Q Q Y Y I L N K L N I I K N I (178)
++ ++
AcrIC3 ----L --------------F S E L -A -A -S V E A T N E ----M Y R E L D A E R A Q I N K A L -E G
MGV-GENOME-0156780_CDS_0001 5 AcrIF23 0.58 View Alignment MGV-GENOME-0156780_CDS_0001 V K E N S I E E D I K N A E H F I K S -I -K --------T -D K E ------Y K E E N G W H G Y --Y -N K E I (60)
N + +A + N + ++
AcrIF23 M T -N -F Q T W L D S A ----D I P V Q Q N G Q W I D L E -T G I -A Y D P S Y N Y A A N T R R A S L S P R G I D A
MGV-GENOME-0156780_CDS_0001 V E L A R I L Q H I -L S H Y K R V F K E A N R Y K N M Y K A E H E I H L V R N E Q L D R K E N A V T -K -C -N E L I (120)
+A+ R K I++ E + +
AcrIF23 R A V A K T F G G R A -------L T G T A R Q K E W A E ---K I R A ---E K V Q Q M N Q D Q A E -M -A ----
MGV-GENOME-0156780_CDS_0001 I E N A K L K E E N E E L K Q D R N N N Y Q M I A -L A Q -N E M -L G Y M Q G Y -E D G K -K -S K R S A V A Y I V E (180)
+ L RN + + K A V
AcrIF23 C D P S G L L T A A K F W I E N R N D S A ---Q E -I A G -F V M -Q Q K A L -L A Q H -R -S A K A A G Q A D K V A
MGV-GENOME-0156780_CDS_0001 N Q Q Y Y I L N K L N I I K N I (196)
AcrIF23 K I A A E Y N A L T A R W -G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;