3D Structure for MGV-GENOME-0156212_CDS_0012 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 87.53 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0156212_CDS_0012 1 AcrIE1 0.71 View Alignment MGV-GENOME-0156212_CDS_0012 M E N S I E E -I E I -L E E -L R T H G Y N M L L M K Y E N R I K T N R K I D Q A L E H I -V S D Y K K V L K -E N E (60)
ME + L + + E + +L
AcrIE1 M E K K ---L S D -A Q V -A L --------V A A W R K Y ----P D L ---R E -S L -E E A A S I L S L I V F
MGV-GENOME-0156212_CDS_0012 I L K E E K E Q A W E E W N N L E Q G S Y G T -E Q K L K Q Q I K E L -K -K -E N E E L K F E E R R R I I G K Y G D A (120)
+ + ++
AcrIE1 ----------------------Q A ----E T L S D Q -A -N -E L A N Y I R R Q G -----------
MGV-GENOME-0156212_CDS_0012 E I -H D V I N K I L S N D Y I P V Q K V K D N I K K L E I K K E K A R G E R N I L E R F A I E K S I N S L Q E L L E S (180)
+ + NI +K + G + I ++++
AcrIE1 --L --------E ----E A E G A C R N I D I M R A K W V E V C G ---E V N Q H ----G I R V Y G D A I D R
MGV-GENOME-0156212_CDS_0012 E -E (183)
+ +
AcrIE1 D V D
MGV-GENOME-0156212_CDS_0012 2 AcrIE6 0.65 View Alignment MGV-GENOME-0156212_CDS_0012 M E N S I E E I E I L E E L R T H G Y N M L L M K Y E -N R I K T N R K I D Q A L E H I -V -S D Y K K V L K E N E -I (60)
M N + E+LE ++ E
AcrIE6 M N N ---D T E V L E ---------------Q -----------Q ----I -K -A F E L L A D E L K D R
MGV-GENOME-0156212_CDS_0012 L -K E -E K E Q A W E E W N N L E Q G S Y G T E Q K L K -Q -Q -I -K -E L K K -E -N E E -L K -F E E R R R I I (120)
E +
AcrIE6 -L -P T L -----E I L -----------S P M Y T -A -V -M -V T Y D -L -I G -K Q -L A --------
MGV-GENOME-0156212_CDS_0012 G K Y G D A E I H D V I N K I L S N D Y -I P V Q K -V -K -D -N -I K K L E I K K E K -A R G E R N I -L E R F A I (180)
I LE G A
AcrIE6 --------------------S -----R -R -A -E -L I E I L E E ----Q Y P G H ---A ----A -
MGV-GENOME-0156212_CDS_0012 E K S -I -N S L Q E L L E S E -E (198)
S +
AcrIE6 ---D -L -S -I ---K N L C P
MGV-GENOME-0156212_CDS_0012 3 AcrIC3 0.60 View Alignment MGV-GENOME-0156212_CDS_0012 M E N S I E E I E I L E E L R T H -G Y N M L L M K Y E N R I K T N R K I D -Q -A -L E H I V -S -D Y K K V L K E N (60)
M + L + + ++ +
AcrIC3 M S -I -Q V T S T ---N G -R T --V N L E I E L G S V V A S S ----G -Q -V -K F M A D -K -T -------
MGV-GENOME-0156212_CDS_0012 E I L K E E K E Q -A W E E W N N L E Q G S Y G T E Q K -L K Q Q I K E L K -K E N E E L K F E E R R R I I G K Y G D A (120)
+ E+ G
AcrIC3 -------D R G -L ------E S R F ----L -V ---P ----E A ------------------G N R
MGV-GENOME-0156212_CDS_0012 E I H -D V I N K I L S N D Y I P V Q K V K D N I K K L E I K K E K A R G E R N I L E R F -A I E K S I N S L Q E L L E (180)
I + + + L + E R ++ +++ +L
AcrIC3 R I E V A L ----T G ---R D L E A A N A L F S E L A A S V E A T N E ---M -Y R -E -L D A E R A Q I N K A L -
MGV-GENOME-0156212_CDS_0012 S E E (183)
AcrIC3 E -G
MGV-GENOME-0156212_CDS_0012 4 AcrIIA19 0.60 View Alignment MGV-GENOME-0156212_CDS_0012 M E N S I E E I E I L E E L R T H G Y N M L L M K Y E N R I -K T N R K I D Q A L E H I V S D Y K K V L K E N E I L K E (60)
M +E+ N TN ++ +++S+Y
AcrIIA19 M K L ---I V E V E ----E ----T N Y K N L V N Y T K L T N E S H N I L V N R L I S E Y I T ------K P --
MGV-GENOME-0156212_CDS_0012 E K E -Q A W E E W N N L E Q G S Y G T E Q K L K Q Q I K -E -L -K K E N E E L K F E E R R R I I G K Y G D A E I H D (120)
++ E K +I Y + D
AcrIIA19 --Y E L ----R --------------L D L S E R -Y -S N R D L I E F K ----F M L I E -Y C K E A L Q D
MGV-GENOME-0156212_CDS_0012 V I -N K -I L S N -D -Y I P V Q K V K D N I K -K L E I -K K E K A R G E R N I L E R F -A -I -E K -S -I N -S (180)
+ + S + Y + K
AcrIIA19 I -K E -L A N S -D E A Y E T D E A F E A V F R Q L F -E E V I S -N -------P -D T -V -L -K A -F -H S -
MGV-GENOME-0156212_CDS_0012 L Q E L L E S E E (189)
+ LE
AcrIIA19 Y T S F L E E N K
MGV-GENOME-0156212_CDS_0012 5 AcrIF23 0.59 View Alignment MGV-GENOME-0156212_CDS_0012 M E N S I E E -------------I E I L E E L R T H G -Y N M L L M -K Y E --N -R I -K T N -R K I -D -Q (60)
M N LE +
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A Y D P S Y N Y A A N -T -R R A S L -S P R -G I -D A -R A
MGV-GENOME-0156212_CDS_0012 A L E -H I V S -D Y K K V L K E N E I L K E E K E Q A W E E W N N L E Q G S Y G T E Q K L -K -Q Q -I K E L K K -E (120)
+ + + KE E + +
AcrIF23 V -A K T -F G G R A --L -T G T A R Q K E W A E -------K ----------I -R -A E -K V Q Q M N -Q D
MGV-GENOME-0156212_CDS_0012 N E E L K F E E R R R I -I G K Y G D A E I -H -D -V I N K I L S N D Y I ---P V Q K V K D N I K K L E I K K E K A (180)
+ E + + N + + K L + + A
AcrIF23 Q A E M -A ---C D -P --S G ---L -L -T -A -A K F W I E N R N D S A Q E I A G F V M Q Q K A L L A Q H R S A
MGV-GENOME-0156212_CDS_0012 R G E R N I L E R F A I E K S I N S L Q E L L E S E -E (208)
+ ++ I N L+
AcrIF23 K A A G Q A D K V A K I A A E Y N A L T A R W ---G F
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;