3D Structure for MGV-GENOME-0156184_CDS_0006 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 97.16 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0156184_CDS_0006 1 AcrIE6 0.73 View Alignment MGV-GENOME-0156184_CDS_0006 M L E D ---K I D Q L E H A K K C ----Y -L -R D L -E -P E H -M A I V Q R D -----F ----G L Q V A S K (60)
M ++Q +A + +
AcrIE6 M -N N D T E V L E Q Q I K A F E L L A D E -L -K D R -L -P T -L E I -L S P M -Y T A V M V T Y D L I G K Q L A S
MGV-GENOME-0156184_CDS_0006 R R D W L K K Q V K R C D -E E -I E C L -K ---K E (88)
RR L + + L
AcrIE6 R R A E L I E I L E E Q Y P G -H A A D L S I K N L C P
MGV-GENOME-0156184_CDS_0006 2 AcrIE1 0.63 View Alignment MGV-GENOME-0156184_CDS_0006 M L ---E -D ---K I D -----------Q -L -E -H --------A -K -K C Y L R -D L E P E H M -A I (60)
M D + + L +
AcrIE1 M E K K L -S D A Q V A L V A A W R K Y P D L R E -S -L -E -E A A S I L S L -I -V -F Q A E T -L S D Q A N E L -
MGV-GENOME-0156184_CDS_0006 -V -----------Q R D F G L Q V A S K R R D W L K K Q V K -R C D -E -E -I E C L K -K --E (113)
+ + + + V + + +
AcrIE1 A N Y I R R Q G L E E A E G A C R N I D I M R A K W V E V C G E V N Q -H G I -R -V Y G D A I D R D V D
MGV-GENOME-0156184_CDS_0006 3 AcrIIC4 0.61 View Alignment MGV-GENOME-0156184_CDS_0006 M L -E -D K I D ---------Q ---L E H ----A K K ----C Y L R D L -E -P E H M A I V Q R D F G L Q V (60)
M L + K + + + +
AcrIIC4 M K I T S S N F A T I A T S E N F A K L S V L P K N H R E P I K G L F K S A V E Q -F -S S A R D F F K N E N Y S K E L
MGV-GENOME-0156184_CDS_0006 A S K R R D -W -L K K Q V K R C D E E I E C L K ---K -E (91)
A K + V + I+ +
AcrIIC4 A E K F N K E -A V N E A V E K L Q K A I D L A E K Q G I Q F
MGV-GENOME-0156184_CDS_0006 4 AcrIF23 0.60 View Alignment MGV-GENOME-0156184_CDS_0006 M L --E D K I D ---Q L E ---H --------A K K -----C Y L -R D L ----------E -------(60)
M +D + Y+
AcrIF23 M T N F Q T W L D S A D I P V Q Q N G Q W I D L E T G I A -Y D P S Y N Y A A N --T R R A S L S P R G -I D A R A V A
MGV-GENOME-0156184_CDS_0006 ---------------------------------P ----E H M A I V Q -R -D -F -------G L (120)
+ +++ F +
AcrIF23 K T F G G R A L T G T A R Q K E W A E K I R A E K V Q Q M N Q D Q A E M A C D P S G L L T A -A -K F W I E N R N D S A
MGV-GENOME-0156184_CDS_0006 ---Q V A S K R R D W L K ----K --------Q V K R C D E E I E C L K K ---E (165)
L V + E L
AcrIF23 Q E I A G F V M Q Q K A L L A Q H R S A K A A G Q A D K V A K I A A E Y N A L T A R W G F
MGV-GENOME-0156184_CDS_0006 5 AcrIF2-IC2 0.53 View Alignment MGV-GENOME-0156184_CDS_0006 M L E ---D K I D Q L E H A K -K C Y L R D L -------E --------------P -E -H -M -A I V Q R D (60)
M+ I Q + +++Q
AcrIF2-IC2 M A T K T A Q M I A Q Q H K D T V A A C E A --A E A I A I A -K D Q V W D G E G Y T K Y T F D -D -N -S V L I Q S G
MGV-GENOME-0156184_CDS_0006 --------F ---G L Q V A S -K -R R D W L K K Q V -K -R C -D E E I E C L K K E (106)
+ D ++ + +E + E
AcrIF2-IC2 T T Q Y A M D A D D A D S I K G Y A D -W L D D E A R S A E A -S E -I E R L L E S V E E E
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;