3D Structure for MGV-GENOME-0155980_CDS_0030 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 94.44 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0155980_CDS_0030 1 AcrVIA2 0.72 View Alignment MGV-GENOME-0155980_CDS_0030 M K K K L I K C -P Y C G S A S G V C N E F K V C -G -I E Y Y N F N G L F N G E E I T G P Y -E H T K Y V E C I D C G (60)
M K CG GE + C+ C
AcrVIA2 M W -K --C -K -K C G C D R F Y Q D I T -G -G -I -S E V L E M -D K D G E V L D E I D D V E Y G D F S C A K C D
MGV-GENOME-0155980_CDS_0030 K R I M T Y E ---K F A E ------N --Y --I (87)
+ E +
AcrVIA2 N S S S K I Q E I A Y W D E I N G K N K T Y L S K D K
MGV-GENOME-0155980_CDS_0030 2 AcrIF18 0.49 View Alignment MGV-GENOME-0155980_CDS_0030 M K K K L I K C P Y C G S A S G V C N E F K V C -G I E Y Y N F N G -L -F N G E E I T G P Y E --H T K -Y -V E -C (60)
M IK Y + + + NGE
AcrIF18 M -T T -I K A A Y I S K D ----Q N W N D G T -T T --Y W F -D -V -N G E T F G V V H G G E S -W N -A K -V V
MGV-GENOME-0155980_CDS_0030 I D C G K R I M --T ---Y E K -F A E N Y -I (85)
G T +
AcrIF18 D C D G A P S D Q Y T V D Q F N -I T E D M I A E
MGV-GENOME-0155980_CDS_0030 3 AcrIIA4 0.45 View Alignment MGV-GENOME-0155980_CDS_0030 M K K K ------------L -I K -C P Y --C G -----------S -A -S G -V C N E F K V C G I E Y Y N (60)
M +E +
AcrIIA4 M N I N D L I R E I K N K D Y T -V K -L S G T D S N S I T Q L I I R V N N D G N -E Y -V -I S E S E N E -----S
MGV-GENOME-0155980_CDS_0030 F -N G L F N G E E -I -T G P Y E H T K -Y V E C I -D C G K -R I -M -T -Y E K --F A E N Y I (111)
E +
AcrIIA4 I V ------E K F -I S -A F K N G -W N -Q E Y E -D E E E F -Y -N -D M Q T I T L K S E L N
MGV-GENOME-0155980_CDS_0030 4 AcrVIB1 0.44 View Alignment MGV-GENOME-0155980_CDS_0030 M K K K ------L ---I K -------------C P Y -C G ----S A ------S -G -V -C -N -E --(60)
MK +
AcrVIB1 M K D L D L S K L K G E E I A Q W L L N N K K A T A I Q L S S E R T D T D D G F M H I L V H K D E Y V E I -I -Y -S Y
MGV-GENOME-0155980_CDS_0030 F K V ------C G I E Y Y -N F N G L F -N G E E I T G P Y E H T K Y V E -C I -D C -G K R I -M T -------(120)
K+ Y + + G
AcrVIB1 L K I D E D D V M Q N F T I Y S K ---R -W -----G N -I D N S Y F E -L Q -T -F E G E I F T G E S D K I L C G
MGV-GENOME-0155980_CDS_0030 Y E K ---F A E -N Y I (133)
+
AcrVIB1 V L S L G D -L T T -L K
MGV-GENOME-0155980_CDS_0030 5 AcrIC4 0.43 View Alignment MGV-GENOME-0155980_CDS_0030 M K K K L I K C P -Y C G S A S G -V C N E F K V C G I E Y Y N F N G L F N G E E -I T -G P -Y E H T K Y V E C I D C (60)
M I E + + V
AcrIC4 M D -N K I T P -A -D E E K I R E W L ---N -----C ------E --E -A -S V D -N -D G D V W V A V P M T
MGV-GENOME-0155980_CDS_0030 G K R I M T ------Y E K -F A E N Y I (82)
G+ + Y
AcrIC4 G H -W L S D E Q K A K Y I E W R -G D E T
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;