3D Structure for MGV-GENOME-0153725_CDS_0008 Protein Sequence:
90 < plddt <=100 ;
70 < plddt <= 90 ;
50 < plddt <= 70 ;
0 <= plddt <= 50 ;
Predicted 3D structure by Alphafold
with pLDDT = 91.13 ;
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pLDDT is for per-residue accuracy of the structure, which representes the quality of the residue.
A higher value indicates better prediction accuracy. More detail please see:
Alphafold .
Residues were colored according to plddt ( blue-> high quality ; red-> low quality ).
Protein ID Rank TMvec Hit TM Score Sequence Alignment MGV-GENOME-0153725_CDS_0008 1 AcrIB1 0.87 View Alignment MGV-GENOME-0153725_CDS_0008 M L Y -R T I S L F D L Q Q Q K I G K D E I T K V L S D F S C -P L N K E V E H F M H N K A Y D F E R V G L A R T Y L I (60)
M L I E K ++E F H KA FE+ + TY++
AcrIB1 M E S K N L R K L L N E Y E -E I D I N E M L K N F R S I K N S G T K N D I E I F L H E K A I K F E K S S I S S T Y V V
MGV-GENOME-0153725_CDS_0008 Y A Y P D E D E L P V L V A I Y S L G Q S H V E I N ----D D L N K N M K K K I F G S T -Y --P -M G K N I K T L L (120)
++ ++ + + I L+K+ KK+ S + L
AcrIB1 F S -E ----D N E I L G Y F T I A N R S L V I P K E N F G I L S K T Q Q K K L G N S A A I L K -N G D L M T S S F L
MGV-GENOME-0153725_CDS_0008 I G Q L S K N Y A N D N N Q Y I T G D I L M G L I F Q R I K E I H T L F P S V A I H I D C E D K K E L R R F Y E R Y G F (180)
+GQL KNY D + ITG L + I+ L I ++C L FY GF
AcrIB1 L G Q L G K N Y S D D I E N L I T G R E L L T F A Y D L F L K I K E L I N V K Y I W L E C Q N E P K L I S F Y Q N F G F
MGV-GENOME-0153725_CDS_0008 Q L F K K ---Q -N D M L I Y L M A T N K I L E S E K V K V N V (213)
+ +
AcrIB1 K M L E S L T S -E E G L -------K -V --M I M -E L -K
MGV-GENOME-0153725_CDS_0008 2 AcrVA5 0.57 View Alignment MGV-GENOME-0153725_CDS_0008 M L Y R T I S L F D L Q Q Q K I G K D E I T K V L S D F S C P L N K E V E H F M H N K A Y D F E R V G L A R T Y L I Y A (60)
M E
AcrVA5 M K -I E -L S G G Y I C Y -S I -----------------E -----------------E -------
MGV-GENOME-0153725_CDS_0008 Y P D E D E L P V L V A I Y S L G Q S H V E I N D D L N K N M K K K I F G S T Y P M G K N I K T L L I G Q L S K N Y A N (120)
+ I + +
AcrVA5 ----------------------------------------------D E V T I D M V E V T ---
MGV-GENOME-0153725_CDS_0008 D N -N Q Y I T G D I L M G L I F Q R I K E I H T L -F P S V A I H I D C E ---D ---K K E L R R F Y E R Y G F Q L (180)
G L + ++E + I + D +L FY F
AcrVA5 T -K -R Q G I G S Q L I D M V K D V A R E ----V --G L P I G L Y A Y P Q D D S I S Q E D L I E F Y F S N D F E Y
MGV-GENOME-0153725_CDS_0008 F K K Q N D M L I Y L M A T N K I L E S E K V K V N V (207)
D +
AcrVA5 D P D D V D --------G ----R -L M R -W S
MGV-GENOME-0153725_CDS_0008 3 AcrVIA1_Lse 0.41 View Alignment MGV-GENOME-0153725_CDS_0008 M L Y --R -T -I S L F D L Q Q Q K I G K D E I T K V -L S D ----F S C P L N K E V E H F M H N K A Y D F -E R V (60)
M+Y + + + K+ + ++ ++E +
AcrVIA1_Lse M I Y Y I K D -L K V K G K I F E N L M N K E A V E G -L I T F L K K A E F E I Y S R E N Y S K Y N K W F E -M W -K S
MGV-GENOME-0153725_CDS_0008 G L A R T Y L I Y A Y P D E D E -L P V L V A -I Y S ---L G Q -S H V E I N D D L N K N M K K K I F G S T Y P M G K (120)
+ + +
AcrVIA1_Lse P T S -S L V F W K ------N -Y S F R C H L L F V I E K D G E C L -G -------------------I -P
MGV-GENOME-0153725_CDS_0008 N I K T L L -I G -Q -L -S -K N Y A N D N N Q Y -I T G D I L M G -L I -F -Q R I K E I H T -L -F P -S -V -A (180)
L + +
AcrVIA1_Lse A S V F E S V -L Q -I -Y -L A D ----P F -A P -D T K ----E L -F -V -E V C N L Y E C -L -A D -V -T -
MGV-GENOME-0153725_CDS_0008 I H I D C E -------D --------------------------K K -E L R -R F Y E R ------Y G (240)
+ E
AcrVIA1_Lse V V E H F E A E E S A W H K L T H N E T E V S K R V Y S K D D D E L L K Y I P E F L D T -I A T N K K -S Q K Y N Q I Q
MGV-GENOME-0153725_CDS_0008 F Q L F ---K K ----Q -N D M -L ---I Y L M A T N K I L E S -------E -K V ---K -V N V (294)
+ K I + + +
AcrVIA1_Lse G K I Q E I N K -E I A T L Y E S -S -E D Y I F T E Y V S N L Y R E S A K L E Q H S K Q I L K E -E -L N
MGV-GENOME-0153725_CDS_0008 4 AcrIC11 0.39 View Alignment MGV-GENOME-0153725_CDS_0008 M L Y -R T I S L F D L Q Q -Q K I G K D E I T K V L S D F -S C P L N K E V E H F M H N K A Y D F E R V G L -A -R T (60)
M +I++ +G D LS + E + +V + R
AcrIC11 M N K E T Q I T A S ----A -V V G E D K R L E F L S K H F G V R F A R R G E A L V F A W L L R L A K V P I E W T R L
MGV-GENOME-0153725_CDS_0008 Y L -I Y -A Y P D E D E L P V L V A I Y S L G -Q -S H V E I N D D L N K N M K K K I F G S T Y P M G K N I K T L L I (120)
Y + + I
AcrIC11 Q -Y -Y T L -S ---------------N -S G F Y L A P --------------R -------E L R -I
MGV-GENOME-0153725_CDS_0008 G Q L S K N Y A N D N N Q Y I T G D I L M G L I F Q R I K E I -H T L F P S V A -I -H I D C E ------D -----(180)
+ + G++ + + + +
AcrIC11 S E C E ---L --------S A D A V G I V A T M -L T L R -Q ------L -A -H E S A A C V E A D S T Y P A A
MGV-GENOME-0153725_CDS_0008 ------K K E L R R F Y E R Y G F Q L -F K K Q N D M L I Y L M A T N K I L E S E K V K V N V (229)
Y + K + + +
AcrIC11 K L A V T A S V K F A Q Q Y H H L A A Y -S -V K ---H ----A ---E S I N I Y R -A I -D
MGV-GENOME-0153725_CDS_0008 5 AcrIA1 0.38 View Alignment MGV-GENOME-0153725_CDS_0008 M L -----------------------------------------Y R T I S ---L F D --L ---(60)
M + +
AcrIA1 M R S K M I K K E E K D N K I Y I T V K D E E T G I E W T A V V E K V E F E W C V K Q K E E L E V E D A E K S V M L D Y
MGV-GENOME-0153725_CDS_0008 -Q Q Q K --I -G K D -E I T K V L S D -F S C P L N K E V E H F M H N K A Y D F E R V -G L A R T ---Y L I Y A Y (120)
+ K + + H ++ +
AcrIA1 A L F G -N C A I P K -V -T A E E Y K N S L T K Y T G E K M S R L L H I L Y N Y E I V S Q N D T K N I W V T E L S R -
MGV-GENOME-0153725_CDS_0008 P D E D E L P V L V A I -Y S L -G ---Q S -H -V E I N D D -L -N K N M K K K I F G S T Y P M G ---K N I K T L (180)
+ Y V +N+ + +
AcrIA1 --------C L R R S Y L M R -K E G K -T -K V G L N E A M -K M ----H I G S -G L H M R L Q S L L R K H G F
MGV-GENOME-0153725_CDS_0008 L -I G Q L S K N Y A N D N N Q Y I T G D I L M G L I F Q R I K E I -H -T L F P -S V A I H I D C -E --------(240)
G I RI +I
AcrIA1 E T -E V R V Q R K T A ------L G ----F Q I V G R I D V Y D -K ----E E N V I Y E L K Y T H N D K L D S V
MGV-GENOME-0153725_CDS_0008 D ---K K E L R R F Y -E R Y G F Q L F --K K ---Q -N D M L -I -Y L -M A T N -K ---I L E S -------(300)
Y E I A +
AcrIA1 R L N N Y L R Q L N Y Y I E M A N A M K G Y L V -I V H A D G S V E E I K R -D W A E -T D L E K R A N A F G I Y V E E
MGV-GENOME-0153725_CDS_0008 -E --------K --------V ---K -V -N V (329)
+
AcrIA1 N T L P P K K S R P -D A E C I E C P F Y N F -C W G K L
Amino Acid Color Coding: Negatively charged: D ,E ; Positively charged: H ,R ,K ; Hydrophobic: A ,I ,L ,V ; Polar: N ,Q ,S ,T ; Cyclic: P ; Aromatic, hydrophobic: F ,W ; Aromatic, polar: Y ; Tiny, hydrophobic: G ; Sulfur-containing, polar: C ; Sulfur-containing, hydrophobic: M ;